dido1 death inducer-obliterator 1 [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: dido1provided by ZNC
Official Full Name: death inducer-obliterator 1provided by ZNC
Primary source: ZFIN:ZDB-GENE-030131-6117
See related: Ensembl:ENSDARG00000057940 AllianceGenome:ZFIN:ZDB-GENE-030131-6117
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: datf1l; fi35b04; wu:fi35b04; zgc:158157
Summary: Predicted to enable metal ion binding activity. Predicted to be involved in transcription, DNA-templated. Predicted to act upstream of or within apoptotic signaling pathway. Predicted to be active in nucleus. Orthologous to human DIDO1 (death inducer-obliterator 1). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs: all
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Genomic context

Location:: chromosome: 11

Exon count:: 6

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCz11 (GCF_000002035.6)	11	NC_007122.7 (18545558..18557277, complement)
105	previous assembly	GRCz10 (GCF_000002035.5)	11	NC_007122.6 (18383216..18394935, complement)

Chromosome 11 - NC_007122.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

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General gene information

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Markers

fi35b04.x1 (e-PCR)
- UniSTS:204560

fb4406 (e-PCR)
- UniSTS:187216

fc63b08.y1 (e-PCR)
- UniSTS:194172

fb78f07.x1 (e-PCR)
- UniSTS:187579

fb44g06.x1 (e-PCR)
- UniSTS:203216

Gene Ontology Provided by ZFIN

Function	Evidence Code	Pubs
enables metal ion binding	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
acts_upstream_of_or_within apoptotic signaling pathway	IEA Inferred from Electronic Annotation more info
involved_in regulation of transcription by RNA polymerase II	IBA Inferred from Biological aspect of Ancestor more info

Component	Evidence Code	Pubs
part_of Set1C/COMPASS complex	IEA Inferred from Electronic Annotation more info
is_active_in nucleus	IBA Inferred from Biological aspect of Ancestor more info
located_in nucleus	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: death-inducer obliterator 1

Names: datf1; death associated transcription factor 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.