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    tmem184a transmembrane protein 184a [ Danio rerio (zebrafish) ]

    Gene ID: 406841, updated on 2-Nov-2024

    Summary

    Official Symbol
    tmem184aprovided by ZNC
    Official Full Name
    transmembrane protein 184aprovided by ZNC
    Primary source
    ZFIN:ZDB-GENE-040426-2925
    See related
    Ensembl:ENSDARG00000104538 AllianceGenome:ZFIN:ZDB-GENE-040426-2925
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    zgc:66481; zgc:92293; wu:fe01b07; wu:fi16g03; wu:fi41b02
    Summary
    Predicted to enable transmembrane transporter activity. Acts upstream of or within regulation of angiogenesis. Predicted to be located in membrane. Predicted to be active in early endosome membrane. Is expressed in gut; hypothalamus; pronephric duct; sensory system; and yolk syncytial layer. Orthologous to human TMEM184A (transmembrane protein 184A). [provided by Alliance of Genome Resources, Nov 2024]
    Orthologs
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    Genomic context

    See tmem184a in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 3 NC_007114.7 (42923343..42957609)
    105 previous assembly GRCz10 (GCF_000002035.5) 3 NC_007114.6 (42217328..42251594)

    Chromosome 3 - NC_007114.7Genomic Context describing neighboring genes Neighboring gene extracellular leucine-rich repeat and fibronectin type III domain containing 1a Neighboring gene proteasome (prosome, macropain) assembly chaperone 3 Neighboring gene v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog K Neighboring gene integrator complex subunit 1

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    General gene information

    Markers

    Clone Names

    • MGC92293

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    enables transmembrane transporter activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Process Evidence Code Pubs
    acts_upstream_of_or_within regulation of angiogenesis IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    Component Evidence Code Pubs
    is_active_in early endosome membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_213520.1NP_998685.2  transmembrane protein 184A

      See identical proteins and their annotated locations for NP_998685.2

      Status: PROVISIONAL

      Source sequence(s)
      BC057539
      UniProtKB/TrEMBL
      Q6PFI3
      Related
      ENSDARP00000137297.1, ENSDART00000168228.2
      Conserved Domains (1) summary
      pfam03619
      Location:61333
      Solute_trans_a; Organic solute transporter Ostalpha

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007114.7 Reference GRCz11 Primary Assembly

      Range
      42923343..42957609
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)