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    nup97 nuclear pore complex component nup97 [ Schizosaccharomyces pombe (fission yeast) ]

    Gene ID: 2538861, updated on 18-Sep-2024

    Summary

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    Official Symbol
    nup97
    Official Full Name
    nuclear pore complex component nup97
    Primary source
    PomBase:SPCC1620.11
    Locus tag
    SPOM_SPCC1620.11
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Schizosaccharomyces pombe (strain: 972h-)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
    Also known as
    mug87
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    Genomic context

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    See nup97 in Genome Data Viewer
    Location:
    chromosome: III
    Exon count:
    2
    Sequence:
    Chromosome: III; NC_003421.2 (2165021..2168871)

    Chromosome III - NC_003421.2Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene transcription factor TFIIF complex alpha subunit Tfg1 Neighboring gene GTPase-activating protein Neighboring gene protein Cwf26 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003421.2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Schizosaccharomyces pombe nup97, which Genetically Interacts with mex67, is essential for growth and involved in mRNA export. Cho HJ, et al. J Microbiol, 2007 Aug. PMID 17846589
    2. Quantitative analysis of nuclear pore complex organization in Schizosaccharomyces pombe. Varberg JM, et al. Life Sci Alliance, 2022 Jul. PMID 35354597, Free PMC Article
    3. Megadalton-node assembly by binding of Skb1 to the membrane anchor Slf1. Deng L, et al. Mol Biol Cell, 2014 Sep 1. PMID 25009287, Free PMC Article
    4. Splicing Defects of the Profilin Gene Alter Actin Dynamics in an S. pombe SMN Mutant. Antoine M, et al. iScience, 2020 Jan 24. PMID 31927482, Free PMC Article
    5. Heh2/Man1 may be an evolutionarily conserved sensor of NPC assembly state. Borah S, et al. Mol Biol Cell, 2021 Jul 15. PMID 34010011, Free PMC Article

    See all (19) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by PomBase

    Function Evidence Code Pubs
    enables structural constituent of nuclear pore IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Process Evidence Code Pubs
    involved_in poly(A)+ mRNA export from nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in poly(A)+ mRNA export from nucleus IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    involved_in poly(A)+ mRNA export from nucleus IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in protein import into nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cytosol HDA PubMed 
    NOT is_active_in mitotic spindle pole body IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    is_active_in nuclear envelope HDA PubMed 
    part_of nuclear pore IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    part_of nuclear pore IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    nuclear pore complex component nup97

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003421.2 Reference assembly

      Range
      2165021..2168871
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001023460.3 → NP_588469.1  nuclear pore complex component nup97 [Schizosaccharomyces pombe]

      See identical proteins and their annotated locations for NP_588469.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      O94418
      Conserved Domains (1) summary
      pfam04097
      Location:213 → 836
      Nic96; Nup93/Nic96
    Nucleotide Protein
    Heading Accession and Version

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