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    • Showing Current items.

    lido-9 Alcohol dehydrogenase transcription factor myb/sant-like protein [ Caenorhabditis elegans ]

    Gene ID: 173646, updated on 2-Nov-2024

    Summary

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    Official Symbol
    lido-9
    Official Full Name
    Alcohol dehydrogenase transcription factor myb/sant-like protein
    Primary source
    WormBase:WBGene00016576
    Locus tag
    CELE_C41H7.6
    See related
    AllianceGenome:WB:WBGene00016576
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be active in nucleus. [provided by Alliance of Genome Resources, Nov 2024]
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    Genomic context

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    See lido-9 in Genome Data Viewer
    Location:
    chromosome: II
    Exon count:
    3
    Sequence:
    Chromosome: II; NC_003280.10 (3000768..3002411)

    Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene LIn-8 Domain containing Neighboring gene LIn-8 Domain containing Neighboring gene LIn-8 Domain containing

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003280.10

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. SIN-3 acts in distinct complexes to regulate the germline transcriptional program in Caenorhabditis elegans. Robert VJ, et al. Development, 2023 Nov 1. PMID 37818613, Free PMC Article
    2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Gene Ontology Provided by WormBase

    Component Evidence Code Pubs
    is_active_in nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    Alcohol dehydrogenase transcription factor myb/sant-like protein
    NP_494420.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003280.10 Reference assembly

      Range
      3000768..3002411
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_062019.8 → NP_494420.1  Alcohol dehydrogenase transcription factor myb/sant-like protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_494420.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      O17149
      Conserved Domains (1) summary
      pfam03353
      Location:27 → 306
      Lin-8; Ras-mediated vulval-induction antagonizt
    Nucleotide Protein
    Heading Accession and Version

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