pid1 phosphotyrosine interaction domain containing 1 [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: pid1provided by ZNC
Official Full Name: phosphotyrosine interaction domain containing 1provided by ZNC
Primary source: ZFIN:ZDB-GENE-050320-72
See related: AllianceGenome:ZFIN:ZDB-GENE-050320-72
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: wu:fb36h10; zgc:113478
Summary: Predicted to be involved in negative regulation of glucose import and regulation of reactive oxygen species metabolic process. Predicted to act upstream of or within negative regulation of insulin receptor signaling pathway; regulation of cell population proliferation; and regulation of mitochondrial membrane potential. Predicted to be active in cytoplasm. Is expressed in several structures, including hypochord; notochord; optic primordium; optic vesicle; and tail bud. Orthologous to human PID1 (phosphotyrosine interaction domain containing 1). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 18

Exon count:: 3

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCz11 (GCF_000002035.6)	18	NC_007129.7 (46634371..46684352, complement)
105	previous assembly	GRCz10 (GCF_000002035.5)	18	NC_007129.6 (46636353..46686472, complement)

Chromosome 18 - NC_007129.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Markers

fb36h10.x1 (e-PCR)
- UniSTS:190496

fb36h10.x1 (e-PCR)
- UniSTS:190497

Gene Ontology Provided by ZFIN

Process	Evidence Code	Pubs
involved_in negative regulation of D-glucose import	IBA Inferred from Biological aspect of Ancestor more info
acts_upstream_of_or_within negative regulation of insulin receptor signaling pathway	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within regulation of cell population proliferation	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within regulation of mitochondrial membrane potential	IEA Inferred from Electronic Annotation more info
involved_in regulation of reactive oxygen species metabolic process	IBA Inferred from Biological aspect of Ancestor more info

Component	Evidence Code	Pubs
is_active_in cytoplasm	IBA Inferred from Biological aspect of Ancestor more info

General protein information

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Preferred Names: PTB-containing, cubilin and LRP1-interacting protein

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001013504.2 → NP_001013522.2 PTB-containing, cubilin and LRP1-interacting protein

Status: VALIDATED

Source sequence(s)

CABZ01041503, CABZ01041505, FO904920

UniProtKB/TrEMBL

A0A8M9PFE7