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    gnpat glyceronephosphate O-acyltransferase [ Danio rerio (zebrafish) ]

    Gene ID: 572335, updated on 2-Nov-2024

    Summary

    Official Symbol
    gnpatprovided by ZNC
    Official Full Name
    glyceronephosphate O-acyltransferaseprovided by ZNC
    Primary source
    ZFIN:ZDB-GENE-040618-4
    See related
    Ensembl:ENSDARG00000074401 AllianceGenome:ZFIN:ZDB-GENE-040618-4
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Summary
    Predicted to enable glycerone-phosphate O-acyltransferase activity. Predicted to be involved in ether lipid biosynthetic process. Predicted to act upstream of or within cellular lipid metabolic process. Predicted to be located in membrane. Predicted to be active in peroxisomal membrane. Human ortholog(s) of this gene implicated in rhizomelic chondrodysplasia punctata type 2. Orthologous to human GNPAT (glyceronephosphate O-acyltransferase). [provided by Alliance of Genome Resources, Nov 2024]
    Orthologs
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    Genomic context

    See gnpat in Genome Data Viewer
    Location:
    chromosome: 20
    Exon count:
    16
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 20 NC_007131.7 (4157857..4189911)
    105 previous assembly GRCz10 (GCF_000002035.5) 20 NC_007131.6 (3841698..3873788, complement)

    Chromosome 20 - NC_007131.7Genomic Context describing neighboring genes Neighboring gene tripartite motif containing 67 Neighboring gene 40S small subunit processome assembly factor 1 Neighboring gene interaction protein for cytohesin exchange factors 1 Neighboring gene rho guanine nucleotide exchange factor TIAM2 Neighboring gene uncharacterized LOC137488609

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    General gene information

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    enables O-acyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables acyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables glycerone-phosphate O-acyltransferase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables transferase activity IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    acts_upstream_of_or_within cellular lipid metabolic process IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in ether lipid biosynthetic process IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     
    is_active_in peroxisomal membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    General protein information

    Preferred Names
    dihydroxyacetone phosphate acyltransferase
    XP_002665694.2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007131.7 Reference GRCz11 Primary Assembly

      Range
      4157857..4189911
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002665648.7XP_002665694.2  dihydroxyacetone phosphate acyltransferase

      UniProtKB/TrEMBL
      A0A8M1RE83, F1QAU7
      Related
      ENSDARP00000103920.3, ENSDART00000113132.4
      Conserved Domains (1) summary
      cd07993
      Location:119324
      LPLAT_DHAPAT-like; Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: GPAT-like