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    si:ch211-126c2.4 si:ch211-126c2.4 [ Danio rerio (zebrafish) ]

    Gene ID: 563788, updated on 12-Sep-2024

    Summary

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    Official Symbol
    si:ch211-126c2.4provided by ZNC
    Official Full Name
    si:ch211-126c2.4provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-030131-3087
    See related
    Ensembl:ENSDARG00000105479 AllianceGenome:ZFIN:ZDB-GENE-030131-3087
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    fc26g07; wu:fc26g07
    Orthologs
    all
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    Genomic context

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    See si:ch211-126c2.4 in Genome Data Viewer
    Location:
    chromosome: 14
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 14 NC_007125.7 (30898882..30918699, complement)
    105 previous assembly GRCz10 (GCF_000002035.5) 14 NC_007125.6 (30558568..30578382, complement)

    Chromosome 14 - NC_007125.7Genomic Context describing neighboring genes Neighboring gene ubiquitin-like 3b Neighboring gene solute carrier family 7 member 3b Neighboring gene forkhead box O4 Neighboring gene sestrin 4 Neighboring gene si:ch211-191o15.6

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    Bibliography

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    Related articles in PubMed

    1. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    General protein information

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    Preferred Names
    uncharacterized protein PF3D7_1120600

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007125.7 Reference GRCz11 Primary Assembly

      Range
      30898882..30918699 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_068213360.1 → XP_068069461.1  uncharacterized protein PF3D7_1120600 isoform X6

    2. XM_068213359.1 → XP_068069460.1  uncharacterized protein PF3D7_1120600 isoform X5

    3. XM_068213356.1 → XP_068069457.1  uncharacterized protein PF3D7_1120600 isoform X2

      Related
      ENSDARP00000143863.1, ENSDART00000176631.2

    4. XM_068213355.1 → XP_068069456.1  uncharacterized protein PF3D7_1120600 isoform X1

    5. XM_068213362.1 → XP_068069463.1  uncharacterized protein PF3D7_1120600 isoform X8

    6. XM_021481192.2 → XP_021336867.1  uncharacterized protein PF3D7_1120600 isoform X8

      UniProtKB/TrEMBL
      A0A2R8RM09, A0A8M9PZR5
      Related
      ENSDARP00000148345.1, ENSDART00000186441.1
      Conserved Domains (1) summary
      cl26464
      Location:706 → 864
      Atrophin-1; Atrophin-1 family

    7. XM_068213361.1 → XP_068069462.1  uncharacterized protein PF3D7_1120600 isoform X7

    8. XM_068213358.1 → XP_068069459.1  uncharacterized protein PF3D7_1120600 isoform X4

      Related
      ENSDARP00000142095.1, ENSDART00000173451.2

    9. XM_021481191.2 → XP_021336866.1  uncharacterized protein PF3D7_1120600 isoform X4

      UniProtKB/TrEMBL
      A0A140LFS1, A0A8M9QL01
      Related
      ENSDARP00000155284.1, ENSDART00000183543.1
      Conserved Domains (1) summary
      cl26464
      Location:680 → 850
      Atrophin-1; Atrophin-1 family

    10. XM_068213357.1 → XP_068069458.1  uncharacterized protein PF3D7_1120600 isoform X3

    Nucleotide Protein
    Heading Accession and Version

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