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    nck1a NCK adaptor protein 1a [ Danio rerio (zebrafish) ]

    Gene ID: 564584, updated on 17-Aug-2024

    Summary

    Official Symbol
    nck1aprovided by ZNC
    Official Full Name
    NCK adaptor protein 1aprovided by ZNC
    Primary source
    ZFIN:ZDB-GENE-070912-547
    See related
    Ensembl:ENSDARG00000074262 AllianceGenome:ZFIN:ZDB-GENE-070912-547
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    si:dkey-4m11.4
    Summary
    Predicted to enable ephrin receptor binding activity; receptor tyrosine kinase binding activity; and signaling adaptor activity. Predicted to be involved in several processes, including cell migration; regulation of response to endoplasmic reticulum stress; and regulation of translation. Is expressed in female organism. Orthologous to human NCK1 (NCK adaptor protein 1). [provided by Alliance of Genome Resources, Apr 2022]
    Orthologs
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    Genomic context

    Location:
    chromosome: 2
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    106 current GRCz11 (GCF_000002035.6) 2 NC_007113.7 (24963861..24981404, complement)
    105 previous assembly GRCz10 (GCF_000002035.5) 2 NC_007113.6 (25308227..25325770, complement)

    Chromosome 2 - NC_007113.7Genomic Context describing neighboring genes Neighboring gene angiotensin II receptor, type 1a Neighboring gene glycogenin 1a Neighboring gene helicase-like transcription factor Neighboring gene solute carrier family 35 member G2a Neighboring gene STAG1 cohesin complex component a Neighboring gene propionyl-CoA carboxylase subunit beta

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    General gene information

    Markers

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    enables ephrin receptor binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables receptor tyrosine kinase binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables signaling adaptor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007113.7 Reference GRCz11 Primary Assembly

      Range
      24963861..24981404 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_687914.6XP_693006.3  cytoplasmic protein NCK1

      UniProtKB/TrEMBL
      A0A8N7TBD0
      Related
      ENSDARP00000102138.3, ENSDART00000111212.4
      Conserved Domains (3) summary
      cd11901
      Location:4296
      SH3_Nck1_2; Second Src Homology 3 domain of Nck1 adaptor protein
      cl15255
      Location:213309
      SH2; Src homology 2 (SH2) domain
      cl17036
      Location:126182
      SH3; Src Homology 3 domain superfamily