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    fam114a2 family with sequence similarity 114 member A2 [ Danio rerio (zebrafish) ]

    Gene ID: 563599, updated on 2-Nov-2024

    Summary

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    Official Symbol
    fam114a2provided by ZNC
    Official Full Name
    family with sequence similarity 114 member A2provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-030131-6308
    See related
    Ensembl:ENSDARG00000079508 AllianceGenome:ZFIN:ZDB-GENE-030131-6308
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    fi43h01; wu:fi43h01; si:dkey-13f9.5
    Summary
    Orthologous to human FAM114A2 (family with sequence similarity 114 member A2). [provided by Alliance of Genome Resources, Nov 2024]
    Orthologs
    human mouse all
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    Genomic context

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    See fam114a2 in Genome Data Viewer
    Location:
    chromosome: 21
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 21 NC_007132.7 (37423396..37435559, complement)
    105 previous assembly GRCz10 (GCF_000002035.5) 21 NC_007132.6 (37738209..37750436, complement)

    Chromosome 21 - NC_007132.7Genomic Context describing neighboring genes Neighboring gene nuclear receptor binding SET domain protein 1b Neighboring gene mitochondrial ribosomal protein S17 Neighboring gene progesterone receptor membrane component 1 Neighboring gene transfer RNA leucine (anticodon CAA)

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    Bibliography

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    Related articles in PubMed

    1. RFX transcription factors are essential for hearing in mice. Elkon R, et al. Nat Commun, 2015 Oct 15. PMID 26469318, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    General protein information

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    Preferred Names
    protein FAM114A2
    Names
    family with sequence similarity 114, member A2-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007132.7 Reference GRCz11 Primary Assembly

      Range
      37423396..37435559 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_017352977.3 → XP_017208466.1  protein FAM114A2

      UniProtKB/TrEMBL
      A0A8M6YX33, E9QJA6
      Conserved Domains (1) summary
      pfam05334
      Location:91 → 263
      DUF719; Protein of unknown function (DUF719)

    2. XM_001923081.7 → XP_001923116.1  protein FAM114A2

      UniProtKB/TrEMBL
      A0A8M6YX33, E9QJA6
      Related
      ENSDARP00000120692.2, ENSDART00000133585.3
      Conserved Domains (1) summary
      pfam05334
      Location:91 → 263
      DUF719; Protein of unknown function (DUF719)

    3. XM_021469226.2 → XP_021324901.1  protein FAM114A2

      UniProtKB/TrEMBL
      A0A8M6YX33, E9QJA6
      Conserved Domains (1) summary
      pfam05334
      Location:91 → 263
      DUF719; Protein of unknown function (DUF719)

    4. XM_017352976.3 → XP_017208465.1  protein FAM114A2

      UniProtKB/TrEMBL
      A0A8M6YX33, E9QJA6
      Conserved Domains (1) summary
      pfam05334
      Location:91 → 263
      DUF719; Protein of unknown function (DUF719)
    Nucleotide Protein Strain
    Heading Accession and Version

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