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    sfc2 transcription factor TFIIIA [ Schizosaccharomyces pombe (fission yeast) ]

    Gene ID: 2542887, updated on 18-Sep-2024

    Summary

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    Official Symbol
    sfc2
    Official Full Name
    transcription factor TFIIIA
    Primary source
    PomBase:SPAC144.09c
    Locus tag
    SPOM_SPAC144.09C
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Schizosaccharomyces pombe (strain: 972h-)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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    Genomic context

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    See sfc2 in Genome Data Viewer
    Location:
    chromosome: I
    Exon count:
    2
    Sequence:
    Chromosome: I; NC_003424.3 (4669627..4671248, complement)

    Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene AP-3 adaptor complex subunit Apl5 Neighboring gene GTPase Gpn2 Neighboring gene DNAJ domain-containing protein Jac1 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene pig-W

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003424.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Functional analysis of the novel C-terminal domains of S pombe transcription factor IIIA. Schulman DB, et al. J Mol Biol, 2003 Aug 8. PMID 12888341
    2. Identification and characterization of transcription factor IIIA from Schizosaccharomyces pombe. Schulman DB, et al. Nucleic Acids Res, 2002 Jul 1. PMID 12087160, Free PMC Article
    3. Isolation and cloning of four subunits of a fission yeast TFIIIC complex that includes an ortholog of the human regulatory protein TFIIICbeta. Huang Y, et al. J Biol Chem, 2000 Oct 6. PMID 10906331
    4. ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe. Matsuyama A, et al. Nat Biotechnol, 2006 Jul. PMID 16823372
    5. Transcription and RNA-processing in fission yeast mitochondria. Schäfer B, et al. RNA, 2005 May. PMID 15811919, Free PMC Article

    See all (10) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by PomBase

    Function Evidence Code Pubs
    enables 5S rRNA binding IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables DNA binding IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables RNA polymerase III general transcription initiation factor activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in transcription initiation at RNA polymerase III promoter IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Component Evidence Code Pubs
    is_active_in cytosol HDA PubMed 
    is_active_in nucleus HDA PubMed 
    is_active_in nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    transcription factor TFIIIA

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003424.3 Reference assembly

      Range
      4669627..4671248 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001020099.3 → NP_594670.1  transcription factor TFIIIA [Schizosaccharomyces pombe]

      See identical proteins and their annotated locations for NP_594670.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      Q9UTL5
      Conserved Domains (2) summary
      COG5048
      Location:1 → 374
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:28 → 47
      ZF_C2H2; C2H2 Zn finger [structural motif]
    Nucleotide Protein
    Heading Accession and Version

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