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    zgc:77614 zgc:77614 [ Danio rerio (zebrafish) ]

    Gene ID: 393868, updated on 2-Nov-2024

    Summary

    Official Symbol
    zgc:77614provided by ZNC
    Official Full Name
    zgc:77614provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-040426-1844
    See related
    Ensembl:ENSDARG00000114407 AllianceGenome:ZFIN:ZDB-GENE-040426-1844
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Summary
    Predicted to enable zinc ion binding activity. Is expressed in several structures, including ectoderm; forerunner cell group; neural plate; neural rod; and pronephric duct. [provided by Alliance of Genome Resources, Nov 2024]
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    Genomic context

    See zgc:77614 in Genome Data Viewer
    Location:
    chromosome: 8
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 8 NC_007119.7 (34443799..34445586)
    105 previous assembly GRCz10 (GCF_000002035.5) 8 NC_007119.6 (34525543..34527524)

    Chromosome 8 - NC_007119.7Genomic Context describing neighboring genes Neighboring gene E3 ubiquitin-protein ligase RBBP6-like Neighboring gene E3 ubiquitin-protein ligase RBBP6-like Neighboring gene si:busm1-37i06.3 Neighboring gene uncharacterized LOC108190972 Neighboring gene uncharacterized LOC137496369

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    General protein information

    Preferred Names
    uncharacterized protein LOC393868

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_200894.3NP_957188.1  uncharacterized protein LOC393868

      See identical proteins and their annotated locations for NP_957188.1

      Status: VALIDATED

      Source sequence(s)
      BX005399
      UniProtKB/TrEMBL
      A0A2R8QBJ7, A0A2R8RIC4, Q6P2V0
      Related
      ENSDARP00000147542.1, ENSDART00000187788.1
      Conserved Domains (1) summary
      pfam08783
      Location:472
      DWNN; DWNN domain

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007119.7 Reference GRCz11 Primary Assembly

      Range
      34443799..34445586
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_068222905.1XP_068079006.1  uncharacterized protein LOC393868 isoform X1

    Reference GRCz11 ALT_DRER_TU_1

    Genomic

    1. NW_018394736.1 Reference GRCz11 ALT_DRER_TU_1

      Range
      164286..166065
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)