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    CG13921 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 38222, updated on 2-Nov-2024

    Summary

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    Official Symbol
    CG13921provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0035267
    Locus tag
    Dmel_CG13921
    See related
    AllianceGenome:FB:FBgn0035267
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG13921
    Summary
    Is expressed in organism. [provided by Alliance of Genome Resources, Nov 2024]
    Orthologs
    all
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    Genomic context

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    See CG13921 in Genome Data Viewer
    Location:
    62B1-62B1; 3-1.0 cM
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (1746907..1752390)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (1746907..1752390)

    Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene Phosphatidylinositol glycan anchor biosynthesis class W b Neighboring gene Glycerol kinase 2 Neighboring gene Chitinase 2 Neighboring gene uncharacterized protein Neighboring gene Dynein heavy chain at 62B Neighboring gene antisense RNA:CR44351 Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Context-dependent genetic architecture of Drosophila life span. Huang W, et al. PLoS Biol, 2020 Mar. PMID 32134916, Free PMC Article
    2. Evolutionary Dynamics of Abundant Stop Codon Readthrough. Jungreis I, et al. Mol Biol Evol, 2016 Dec. PMID 27604222, Free PMC Article
    3. Drosophila muller f elements maintain a distinct set of genomic properties over 40 million years of evolution. Leung W, et al. G3 (Bethesda), 2015 Mar 4. PMID 25740935, Free PMC Article
    4. Next-generation large-scale binary protein interaction network for Drosophila melanogaster. Tang HW, et al. Nat Commun, 2023 Apr 15. PMID 37061542, Free PMC Article
    5. Phylostratigraphic bias creates spurious patterns of genome evolution. Moyers BA, et al. Mol Biol Evol, 2015 Jan. PMID 25312911, Free PMC Article

    See all (22) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG13921-PB
    CG13921-PC
    CG13921-PD
    CG13921-PE
    CG13921-PF
    CG13921-PG

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_037436.4 Reference assembly

      Range
      1746907..1752390
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001274352.1 → NP_001261281.1  uncharacterized protein Dmel_CG13921, isoform F [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001261281.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      F2FBA3, M9PGV2
      Conserved Domains (1) summary
      pfam04103
      Location:54 → 220
      CD20; CD20-like family

    2. NM_206235.3 → NP_995957.1  uncharacterized protein Dmel_CG13921, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_995957.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q7KVA8, Q8IGL3
      Conserved Domains (1) summary
      pfam04103
      Location:301 → 468
      CD20; CD20-like family

    3. NM_001369971.1 → NP_001356973.1  uncharacterized protein Dmel_CG13921, isoform G [Drosophila melanogaster]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A4D6K3Y7, Q8IGL3
      Conserved Domains (2) summary
      pfam04103
      Location:301 → 467
      CD20; CD20-like family
      pfam15822
      Location:558 → 669
      MISS; MAPK-interacting and spindle-stabilizing protein-like

    4. NM_139399.3 → NP_647656.2  uncharacterized protein Dmel_CG13921, isoform D [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_647656.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8IGL3, Q9W093
      Conserved Domains (1) summary
      pfam04103
      Location:301 → 467
      CD20; CD20-like family

    5. NM_001202090.2 → NP_001189019.1  uncharacterized protein Dmel_CG13921, isoform C [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001189019.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      F2FBA3, M9MRP1
      Conserved Domains (1) summary
      pfam04103
      Location:54 → 221
      CD20; CD20-like family

    6. NM_001274351.1 → NP_001261280.1  uncharacterized protein Dmel_CG13921, isoform E [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001261280.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      F2FBA3, M9PGV2
      Conserved Domains (1) summary
      pfam04103
      Location:54 → 220
      CD20; CD20-like family
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    A0A4D6K3Y7 A0A4D6K3Y7
    M9MRP1 M9MRP1
    M9PGV2 M9PGV2
    Q7KVA8 Q7KVA8
    Q8IGL3 Q8IGL3
    Q9W093 Q9W093

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