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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_046923.1 RefSeqGene
- Range
-
4888..144164
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
NM_001384315.1 → NP_001371244.1 zinc fingers and homeoboxes protein 3 isoform a
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) represents the longest transcript. Variants 1-10 all encode the same isoform (a).
- Source sequence(s)
-
AL022394, AL031257
- Consensus CDS
-
CCDS13315.1
- UniProtKB/Swiss-Prot
- E1P5W5, F5H820, O43145, Q6NUJ7, Q9H4I2
- UniProtKB/TrEMBL
-
A8K8Q0
- Conserved Domains (4) summary
-
- smart00389
Location:621 → 666
- HOX; Homeodomain
- cd00086
Location:500 → 553
- homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.
- pfam11569
Location:850 → 892
- Homez; Homeodomain leucine-zipper encoding, Homez
- pfam18387
Location:105 → 157
- zf_C2H2_ZHX; Zinc-fingers and homeoboxes C2H2 finger domain
-
NM_001384316.1 → NP_001371245.1 zinc fingers and homeoboxes protein 3 isoform a
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) differs in the 5' UTR compared to variant 1. Variants 1-10 all encode the same isoform (a).
- Source sequence(s)
-
AL022394, AL031257
- Consensus CDS
-
CCDS13315.1
- UniProtKB/Swiss-Prot
- E1P5W5, F5H820, O43145, Q6NUJ7, Q9H4I2
- UniProtKB/TrEMBL
-
A8K8Q0
- Related
- ENSP00000452965.1, ENST00000559234.5
- Conserved Domains (4) summary
-
- smart00389
Location:621 → 666
- HOX; Homeodomain
- cd00086
Location:500 → 553
- homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.
- pfam11569
Location:850 → 892
- Homez; Homeodomain leucine-zipper encoding, Homez
- pfam18387
Location:105 → 157
- zf_C2H2_ZHX; Zinc-fingers and homeoboxes C2H2 finger domain
-
NM_001384317.1 → NP_001371246.1 zinc fingers and homeoboxes protein 3 isoform a
Status: REVIEWED
- Description
- Transcript Variant: This variant (4) differs in the 5' UTR compared to variant 1. Variants 1-10 all encode the same isoform (a).
- Source sequence(s)
-
AL022394, AL031257
- Consensus CDS
-
CCDS13315.1
- UniProtKB/Swiss-Prot
- E1P5W5, F5H820, O43145, Q6NUJ7, Q9H4I2
- UniProtKB/TrEMBL
-
A8K8Q0
- Related
- ENSP00000506788.1, ENST00000683867.1
- Conserved Domains (4) summary
-
- smart00389
Location:621 → 666
- HOX; Homeodomain
- cd00086
Location:500 → 553
- homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.
- pfam11569
Location:850 → 892
- Homez; Homeodomain leucine-zipper encoding, Homez
- pfam18387
Location:105 → 157
- zf_C2H2_ZHX; Zinc-fingers and homeoboxes C2H2 finger domain
-
NM_001384318.1 → NP_001371247.1 zinc fingers and homeoboxes protein 3 isoform a
Status: REVIEWED
- Description
- Transcript Variant: This variant (5) differs in the 5' UTR compared to variant 1. Variants 1-10 all encode the same isoform (a).
- Source sequence(s)
-
AL022394, AL031257
- Consensus CDS
-
CCDS13315.1
- UniProtKB/Swiss-Prot
- E1P5W5, F5H820, O43145, Q6NUJ7, Q9H4I2
- UniProtKB/TrEMBL
-
A8K8Q0
- Conserved Domains (4) summary
-
- smart00389
Location:621 → 666
- HOX; Homeodomain
- cd00086
Location:500 → 553
- homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.
- pfam11569
Location:850 → 892
- Homez; Homeodomain leucine-zipper encoding, Homez
- pfam18387
Location:105 → 157
- zf_C2H2_ZHX; Zinc-fingers and homeoboxes C2H2 finger domain
-
NM_001384319.1 → NP_001371248.1 zinc fingers and homeoboxes protein 3 isoform a
Status: REVIEWED
- Description
- Transcript Variant: This variant (6) differs in the 5' UTR compared to variant 1. Variants 1-10 all encode the same isoform (a).
- Source sequence(s)
-
AL022394, AL031257
- Consensus CDS
-
CCDS13315.1
- UniProtKB/Swiss-Prot
- E1P5W5, F5H820, O43145, Q6NUJ7, Q9H4I2
- UniProtKB/TrEMBL
-
A8K8Q0
- Conserved Domains (4) summary
-
- smart00389
Location:621 → 666
- HOX; Homeodomain
- cd00086
Location:500 → 553
- homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.
- pfam11569
Location:850 → 892
- Homez; Homeodomain leucine-zipper encoding, Homez
- pfam18387
Location:105 → 157
- zf_C2H2_ZHX; Zinc-fingers and homeoboxes C2H2 finger domain
-
NM_001384320.1 → NP_001371249.1 zinc fingers and homeoboxes protein 3 isoform a
Status: REVIEWED
- Description
- Transcript Variant: This variant (7) differs in the 5' UTR compared to variant 1. Variants 1-10 all encode the same isoform (a).
- Source sequence(s)
-
AL022394, AL031257
- Consensus CDS
-
CCDS13315.1
- UniProtKB/Swiss-Prot
- E1P5W5, F5H820, O43145, Q6NUJ7, Q9H4I2
- UniProtKB/TrEMBL
-
A8K8Q0
- Conserved Domains (4) summary
-
- smart00389
Location:621 → 666
- HOX; Homeodomain
- cd00086
Location:500 → 553
- homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.
- pfam11569
Location:850 → 892
- Homez; Homeodomain leucine-zipper encoding, Homez
- pfam18387
Location:105 → 157
- zf_C2H2_ZHX; Zinc-fingers and homeoboxes C2H2 finger domain
-
NM_001384321.1 → NP_001371250.1 zinc fingers and homeoboxes protein 3 isoform a
Status: REVIEWED
- Description
- Transcript Variant: This variant (8) differs in the 5' UTR compared to variant 1. Variants 1-10 all encode the same isoform (a).
- Source sequence(s)
-
AL022394, AL031257
- Consensus CDS
-
CCDS13315.1
- UniProtKB/Swiss-Prot
- E1P5W5, F5H820, O43145, Q6NUJ7, Q9H4I2
- UniProtKB/TrEMBL
-
A8K8Q0
- Conserved Domains (4) summary
-
- smart00389
Location:621 → 666
- HOX; Homeodomain
- cd00086
Location:500 → 553
- homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.
- pfam11569
Location:850 → 892
- Homez; Homeodomain leucine-zipper encoding, Homez
- pfam18387
Location:105 → 157
- zf_C2H2_ZHX; Zinc-fingers and homeoboxes C2H2 finger domain
-
NM_001384322.1 → NP_001371251.1 zinc fingers and homeoboxes protein 3 isoform a
Status: REVIEWED
- Description
- Transcript Variant: This variant (9) differs in the 5' UTR compared to variant 1. Variants 1-10 all encode the same isoform (a).
- Source sequence(s)
-
AL022394, AL031257
- Consensus CDS
-
CCDS13315.1
- UniProtKB/Swiss-Prot
- E1P5W5, F5H820, O43145, Q6NUJ7, Q9H4I2
- UniProtKB/TrEMBL
-
A8K8Q0
- Conserved Domains (4) summary
-
- smart00389
Location:621 → 666
- HOX; Homeodomain
- cd00086
Location:500 → 553
- homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.
- pfam11569
Location:850 → 892
- Homez; Homeodomain leucine-zipper encoding, Homez
- pfam18387
Location:105 → 157
- zf_C2H2_ZHX; Zinc-fingers and homeoboxes C2H2 finger domain
-
NM_001384323.1 → NP_001371252.1 zinc fingers and homeoboxes protein 3 isoform a
Status: REVIEWED
- Description
- Transcript Variant: This variant (10) differs in the 5' UTR compared to variant 1. Variants 1-10 all encode the same isoform (a).
- Source sequence(s)
-
AL022394, AL031257
- Consensus CDS
-
CCDS13315.1
- UniProtKB/Swiss-Prot
- E1P5W5, F5H820, O43145, Q6NUJ7, Q9H4I2
- UniProtKB/TrEMBL
-
A8K8Q0
- Related
- ENSP00000454006.1, ENST00000560361.5
- Conserved Domains (4) summary
-
- smart00389
Location:621 → 666
- HOX; Homeodomain
- cd00086
Location:500 → 553
- homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.
- pfam11569
Location:850 → 892
- Homez; Homeodomain leucine-zipper encoding, Homez
- pfam18387
Location:105 → 157
- zf_C2H2_ZHX; Zinc-fingers and homeoboxes C2H2 finger domain
-
NM_001384324.1 → NP_001371253.1 zinc fingers and homeoboxes protein 3 isoform b
Status: REVIEWED
- Source sequence(s)
-
AL022394, AL031257
- Consensus CDS
-
CCDS93040.1
- UniProtKB/TrEMBL
-
A8K8Q0
- Related
- ENSP00000443783.2, ENST00000544979.6
- Conserved Domains (4) summary
-
- smart00389
Location:621 → 666
- HOX; Homeodomain
- cd00086
Location:500 → 553
- homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.
- pfam11569
Location:850 → 891
- Homez; Homeodomain leucine-zipper encoding, Homez
- pfam18387
Location:105 → 157
- zf_C2H2_ZHX; Zinc-fingers and homeoboxes C2H2 finger domain
-
NM_001384325.1 → NP_001371254.1 zinc fingers and homeoboxes protein 3 isoform c
Status: REVIEWED
- Source sequence(s)
-
AL022394, AL031257
- UniProtKB/TrEMBL
-
A8K8Q0
- Conserved Domains (4) summary
-
- smart00389
Location:621 → 666
- HOX; Homeodomain
- cd00086
Location:500 → 553
- homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.
- pfam11569
Location:850 → 892
- Homez; Homeodomain leucine-zipper encoding, Homez
- pfam18387
Location:105 → 157
- zf_C2H2_ZHX; Zinc-fingers and homeoboxes C2H2 finger domain
-
NM_015035.4 → NP_055850.1 zinc fingers and homeoboxes protein 3 isoform a
See identical proteins and their annotated locations for NP_055850.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) differs in the 5' UTR compared to variant 1. Variants 1-10 all encode the same isoform (a).
- Source sequence(s)
-
AB081948, AL022394, AL031257, BI458686
- Consensus CDS
-
CCDS13315.1
- UniProtKB/Swiss-Prot
- E1P5W5, F5H820, O43145, Q6NUJ7, Q9H4I2
- UniProtKB/TrEMBL
-
A8K8Q0
- Related
- ENSP00000415498.3, ENST00000432768.6
- Conserved Domains (4) summary
-
- smart00389
Location:621 → 666
- HOX; Homeodomain
- cd00086
Location:500 → 553
- homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.
- pfam11569
Location:850 → 892
- Homez; Homeodomain leucine-zipper encoding, Homez
- pfam18387
Location:105 → 157
- zf_C2H2_ZHX; Zinc-fingers and homeoboxes C2H2 finger domain
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000020.11 Reference GRCh38.p14 Primary Assembly
- Range
-
41178455..41317731 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_047440045.1 → XP_047296001.1 zinc fingers and homeoboxes protein 3 isoform X3
- UniProtKB/Swiss-Prot
- E1P5W5, F5H820, O43145, Q6NUJ7, Q9H4I2
-
XM_005260341.5 → XP_005260398.1 zinc fingers and homeoboxes protein 3 isoform X2
- UniProtKB/TrEMBL
-
A8K8Q0
- Conserved Domains (4) summary
-
- smart00389
Location:621 → 666
- HOX; Homeodomain
- cd00086
Location:500 → 553
- homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.
- pfam11569
Location:850 → 891
- Homez; Homeodomain leucine-zipper encoding, Homez
- pfam18387
Location:105 → 157
- zf_C2H2_ZHX; Zinc-fingers and homeoboxes C2H2 finger domain
-
XM_047440044.1 → XP_047296000.1 zinc fingers and homeoboxes protein 3 isoform X2
-
XM_047440046.1 → XP_047296002.1 zinc fingers and homeoboxes protein 3 isoform X3
- UniProtKB/Swiss-Prot
- E1P5W5, F5H820, O43145, Q6NUJ7, Q9H4I2
-
XM_047440036.1 → XP_047295992.1 zinc fingers and homeoboxes protein 3 isoform X1
-
XM_047440037.1 → XP_047295993.1 zinc fingers and homeoboxes protein 3 isoform X1
-
XM_047440039.1 → XP_047295995.1 zinc fingers and homeoboxes protein 3 isoform X1
-
XM_011528704.4 → XP_011527006.1 zinc fingers and homeoboxes protein 3 isoform X1
See identical proteins and their annotated locations for XP_011527006.1
- UniProtKB/TrEMBL
-
A8K8Q0
- Conserved Domains (4) summary
-
- smart00389
Location:621 → 666
- HOX; Homeodomain
- cd00086
Location:500 → 553
- homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.
- pfam11569
Location:850 → 892
- Homez; Homeodomain leucine-zipper encoding, Homez
- pfam18387
Location:105 → 157
- zf_C2H2_ZHX; Zinc-fingers and homeoboxes C2H2 finger domain
-
XM_047440040.1 → XP_047295996.1 zinc fingers and homeoboxes protein 3 isoform X1
-
XM_047440038.1 → XP_047295994.1 zinc fingers and homeoboxes protein 3 isoform X1
-
XM_047440041.1 → XP_047295997.1 zinc fingers and homeoboxes protein 3 isoform X1
-
XM_047440042.1 → XP_047295998.1 zinc fingers and homeoboxes protein 3 isoform X1
-
XM_047440043.1 → XP_047295999.1 zinc fingers and homeoboxes protein 3 isoform X1
Alternate T2T-CHM13v2.0
Genomic
-
NC_060944.1 Alternate T2T-CHM13v2.0
- Range
-
42910141..43049531 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054323243.1 → XP_054179218.1 zinc fingers and homeoboxes protein 3 isoform X3
-
XM_054323241.1 → XP_054179216.1 zinc fingers and homeoboxes protein 3 isoform X2
-
XM_054323242.1 → XP_054179217.1 zinc fingers and homeoboxes protein 3 isoform X2
-
XM_054323244.1 → XP_054179219.1 zinc fingers and homeoboxes protein 3 isoform X3
-
XM_054323233.1 → XP_054179208.1 zinc fingers and homeoboxes protein 3 isoform X1
-
XM_054323234.1 → XP_054179209.1 zinc fingers and homeoboxes protein 3 isoform X1
-
XM_054323236.1 → XP_054179211.1 zinc fingers and homeoboxes protein 3 isoform X1
-
XM_054323232.1 → XP_054179207.1 zinc fingers and homeoboxes protein 3 isoform X1
-
XM_054323237.1 → XP_054179212.1 zinc fingers and homeoboxes protein 3 isoform X1
-
XM_054323235.1 → XP_054179210.1 zinc fingers and homeoboxes protein 3 isoform X1
-
XM_054323238.1 → XP_054179213.1 zinc fingers and homeoboxes protein 3 isoform X1
-
XM_054323239.1 → XP_054179214.1 zinc fingers and homeoboxes protein 3 isoform X1
-
XM_054323240.1 → XP_054179215.1 zinc fingers and homeoboxes protein 3 isoform X1