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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_015967.2 RefSeqGene
- Range
-
5002..10215
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
NM_001032381.2 → NP_001027553.1 polyglutamine-binding protein 1 isoform 1
See identical proteins and their annotated locations for NP_001027553.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) differs in the 5' UTR compared to variant 1. Variants 1, 2, 3, 4, and 5 all encode the same protein (isoform 1).
- Source sequence(s)
-
BC012358, CN292761
- Consensus CDS
-
CCDS14309.1
- UniProtKB/Swiss-Prot
- C9JQA1, O60828, Q4VY25, Q4VY26, Q4VY27, Q4VY29, Q4VY30, Q4VY34, Q4VY35, Q4VY36, Q4VY37, Q4VY38, Q9GZP2, Q9GZU4, Q9GZZ4
- UniProtKB/TrEMBL
- A0A0S2Z4V5, A0A0S2Z556
- Related
- ENSP00000365747.1, ENST00000376563.6
- Conserved Domains (1) summary
-
- smart00456
Location:47 → 78
- WW; Domain with 2 conserved Trp (W) residues
-
NM_001032382.2 → NP_001027554.1 polyglutamine-binding protein 1 isoform 1
See identical proteins and their annotated locations for NP_001027554.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) differs in the 5' UTR compared to variant 1. Variants 1, 2, 3, 4, and 5 all encode the same protein (isoform 1).
- Source sequence(s)
-
AB016533, BC012358, CN292761
- Consensus CDS
-
CCDS14309.1
- UniProtKB/Swiss-Prot
- C9JQA1, O60828, Q4VY25, Q4VY26, Q4VY27, Q4VY29, Q4VY30, Q4VY34, Q4VY35, Q4VY36, Q4VY37, Q4VY38, Q9GZP2, Q9GZU4, Q9GZZ4
- UniProtKB/TrEMBL
- A0A0S2Z4V5, A0A0S2Z556
- Related
- ENSP00000391759.2, ENST00000447146.7
- Conserved Domains (1) summary
-
- smart00456
Location:47 → 78
- WW; Domain with 2 conserved Trp (W) residues
-
NM_001032383.2 → NP_001027555.1 polyglutamine-binding protein 1 isoform 1
See identical proteins and their annotated locations for NP_001027555.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (4) differs in the 5' UTR compared to variant 1. Variants 1, 2, 3, 4, and 5 all encode the same protein (isoform 1).
- Source sequence(s)
-
BC012358, BX362311, CN292761
- Consensus CDS
-
CCDS14309.1
- UniProtKB/Swiss-Prot
- C9JQA1, O60828, Q4VY25, Q4VY26, Q4VY27, Q4VY29, Q4VY30, Q4VY34, Q4VY35, Q4VY36, Q4VY37, Q4VY38, Q9GZP2, Q9GZU4, Q9GZZ4
- UniProtKB/TrEMBL
- A0A0S2Z4V5, A0A0S2Z556
- Related
- ENSP00000498362.1, ENST00000651767.1
- Conserved Domains (1) summary
-
- smart00456
Location:47 → 78
- WW; Domain with 2 conserved Trp (W) residues
-
NM_001032384.1 → NP_001027556.1 polyglutamine-binding protein 1 isoform 1
See identical proteins and their annotated locations for NP_001027556.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (5) differs in the 5' UTR compared to variant 1. Variants 1, 2, 3, 4, and 5 all encode the same protein (isoform 1).
- Source sequence(s)
-
AJ005893, BC012358, BE396796
- Consensus CDS
-
CCDS14309.1
- UniProtKB/Swiss-Prot
- C9JQA1, O60828, Q4VY25, Q4VY26, Q4VY27, Q4VY29, Q4VY30, Q4VY34, Q4VY35, Q4VY36, Q4VY37, Q4VY38, Q9GZP2, Q9GZU4, Q9GZZ4
- UniProtKB/TrEMBL
- A0A0S2Z4V5, A0A0S2Z556
- Related
- ENSP00000379985.1, ENST00000396763.6
- Conserved Domains (1) summary
-
- smart00456
Location:47 → 78
- WW; Domain with 2 conserved Trp (W) residues
-
NM_001167989.2 → NP_001161461.1 polyglutamine-binding protein 1 isoform 4
See identical proteins and their annotated locations for NP_001161461.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (8) differs in the 5' UTR and uses a different splice site in the 3' coding region, compared to variant 1. The resulting protein (isoform 4) is shorter by 1 aa when it is compared to isoform 1.
- Source sequence(s)
-
AJ973597, AJ973606, BE385548, BI818141, CD365745, CN292761
- UniProtKB/TrEMBL
-
A0A0S2Z556
- Conserved Domains (1) summary
-
- smart00456
Location:47 → 78
- WW; Domain with 2 conserved Trp (W) residues
-
NM_001167990.2 → NP_001161462.1 polyglutamine-binding protein 1 isoform 5
See identical proteins and their annotated locations for NP_001161462.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (9) differs in the 5' UTR and uses a different splice site in the coding region, compared to variant 1. The resulting protein (isoform 5) is shorter when it is compared to isoform 1.
- Source sequence(s)
-
BC012358, CD051018
- UniProtKB/TrEMBL
-
A0A0S2Z556
-
NM_001167992.1 → NP_001161464.1 polyglutamine-binding protein 1 isoform 6
See identical proteins and their annotated locations for NP_001161464.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (10) lacks a 5' UTR and uses different splice sites in the coding region, compared to variant 1. The resulting protein (isoform 6) is shorter when it is compared to isoform 1.
- Source sequence(s)
-
AJ973605, BC012358, CN292761
- UniProtKB/Swiss-Prot
-
O60828
-
NM_005710.2 → NP_005701.1 polyglutamine-binding protein 1 isoform 1
See identical proteins and their annotated locations for NP_005701.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) represents the longest transcript and encodes the longer isoform (1). Variants 1, 2, 3, 4, and 5 all encode the same protein (isoform 1).
- Source sequence(s)
-
AJ005893, BC012358
- Consensus CDS
-
CCDS14309.1
- UniProtKB/Swiss-Prot
- C9JQA1, O60828, Q4VY25, Q4VY26, Q4VY27, Q4VY29, Q4VY30, Q4VY34, Q4VY35, Q4VY36, Q4VY37, Q4VY38, Q9GZP2, Q9GZU4, Q9GZZ4
- UniProtKB/TrEMBL
- A0A0S2Z4V5, A0A0S2Z556
- Related
- ENSP00000218224.4, ENST00000218224.9
- Conserved Domains (1) summary
-
- smart00456
Location:47 → 78
- WW; Domain with 2 conserved Trp (W) residues
-
NM_144495.3 → NP_652766.1 polyglutamine-binding protein 1 isoform 3
See identical proteins and their annotated locations for NP_652766.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (7) contains a different 5' UTR and lacks an alternate in-frame exon in the 3' coding region, compared to variant 1. The resulting protein (isoform 3) is shorter when it is compared to isoform 1. Variant 7 is also known as variant PQBP-1d.
- Source sequence(s)
-
AJ973593, BC012358, CN292761
- Consensus CDS
-
CCDS55412.1
- UniProtKB/Swiss-Prot
-
O60828
- Related
- ENSP00000365750.4, ENST00000376566.8
- Conserved Domains (1) summary
-
- smart00456
Location:47 → 78
- WW; Domain with 2 conserved Trp (W) residues
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000023.11 Reference GRCh38.p14 Primary Assembly
- Range
-
48897930..48903143
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_017029207.2 → XP_016884696.1 polyglutamine-binding protein 1 isoform X2
- UniProtKB/TrEMBL
-
A0A0S2Z556
- Conserved Domains (1) summary
-
- smart00456
Location:47 → 78
- WW; Domain with 2 conserved Trp (W) residues
-
XM_047441754.1 → XP_047297710.1 polyglutamine-binding protein 1 isoform X3
-
XM_005272571.4 → XP_005272628.1 polyglutamine-binding protein 1 isoform X2
See identical proteins and their annotated locations for XP_005272628.1
- UniProtKB/TrEMBL
-
A0A0S2Z556
- Conserved Domains (1) summary
-
- smart00456
Location:47 → 78
- WW; Domain with 2 conserved Trp (W) residues
-
XM_005272572.5 → XP_005272629.1 polyglutamine-binding protein 1 isoform X3
See identical proteins and their annotated locations for XP_005272629.1
- UniProtKB/Swiss-Prot
-
O60828
- Related
- ENSP00000247140.4, ENST00000247140.8
- Conserved Domains (1) summary
-
- smart00456
Location:47 → 78
- WW; Domain with 2 conserved Trp (W) residues
-
XM_047441753.1 → XP_047297709.1 polyglutamine-binding protein 1 isoform X2
-
XM_011543884.3 → XP_011542186.1 polyglutamine-binding protein 1 isoform X1
See identical proteins and their annotated locations for XP_011542186.1
- UniProtKB/Swiss-Prot
- C9JQA1, O60828, Q4VY25, Q4VY26, Q4VY27, Q4VY29, Q4VY30, Q4VY34, Q4VY35, Q4VY36, Q4VY37, Q4VY38, Q9GZP2, Q9GZU4, Q9GZZ4
- UniProtKB/TrEMBL
- A0A0S2Z4V5, A0A0S2Z556
- Conserved Domains (1) summary
-
- smart00456
Location:47 → 78
- WW; Domain with 2 conserved Trp (W) residues
Reference GRCh38.p14 PATCHES
Genomic
-
NW_025791820.1 Reference GRCh38.p14 PATCHES
- Range
-
56765..61978
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054333395.1 → XP_054189370.1 polyglutamine-binding protein 1 isoform X2
-
XM_054333397.1 → XP_054189372.1 polyglutamine-binding protein 1 isoform X3
-
XM_054333394.1 → XP_054189369.1 polyglutamine-binding protein 1 isoform X2
-
XM_054333398.1 → XP_054189373.1 polyglutamine-binding protein 1 isoform X3
-
XM_054333396.1 → XP_054189371.1 polyglutamine-binding protein 1 isoform X2
-
XM_054333393.1 → XP_054189368.1 polyglutamine-binding protein 1 isoform X1
- UniProtKB/Swiss-Prot
- C9JQA1, O60828, Q4VY25, Q4VY26, Q4VY27, Q4VY29, Q4VY30, Q4VY34, Q4VY35, Q4VY36, Q4VY37, Q4VY38, Q9GZP2, Q9GZU4, Q9GZZ4
- UniProtKB/TrEMBL
-
A0A0S2Z4V5
Alternate T2T-CHM13v2.0
Genomic
-
NC_060947.1 Alternate T2T-CHM13v2.0
- Range
-
48308411..48313619
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054326332.1 → XP_054182307.1 polyglutamine-binding protein 1 isoform X2
-
XM_054326334.1 → XP_054182309.1 polyglutamine-binding protein 1 isoform X3
-
XM_054326331.1 → XP_054182306.1 polyglutamine-binding protein 1 isoform X2
-
XM_054326335.1 → XP_054182310.1 polyglutamine-binding protein 1 isoform X3
-
XM_054326333.1 → XP_054182308.1 polyglutamine-binding protein 1 isoform X2
-
XM_054326330.1 → XP_054182305.1 polyglutamine-binding protein 1 isoform X1
- UniProtKB/Swiss-Prot
- C9JQA1, O60828, Q4VY25, Q4VY26, Q4VY27, Q4VY29, Q4VY30, Q4VY34, Q4VY35, Q4VY36, Q4VY37, Q4VY38, Q9GZP2, Q9GZU4, Q9GZZ4
- UniProtKB/TrEMBL
-
A0A0S2Z4V5
The following Reference Sequences have been suppressed. Explain
These RefSeqs were suppressed for the
cited reason(s). Suppressed RefSeqs do not appear in BLAST databases, related
sequence links, or BLAST links (BLink), but may still be retrieved by clicking on
their accession.version below.
-
NM_001032385.1: Suppressed sequence
- Description
- NM_001032385.1: This RefSeq was permanently suppressed because it is a nonsense-mediated mRNA decay (NMD) candidate.
-
NM_144494.1: Suppressed sequence
- Description
- NM_144494.1: This RefSeq was permanently suppressed because it contains intronic sequence and insufficient support exists for the transcript and the protein.