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    PF3D7_1123900 13 kDa ribonucleoprotein-associated protein, putative [ Plasmodium falciparum 3D7 ]

    Gene ID: 810797, updated on 12-Sep-2024

    Summary

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    Gene symbol
    PF3D7_1123900
    Gene description
    13 kDa ribonucleoprotein-associated protein, putative
    Locus tag
    PF3D7_1123900
    See related
    PlasmoDB:PF3D7_1123900; VEuPathDB:PF3D7_1123900
    Gene type
    protein coding
    RNA name
    13 kDa ribonucleoprotein-associated protein, putative
    RefSeq status
    PROVISIONAL
    Organism
    Plasmodium falciparum 3D7 (isolate: 3D7)
    Lineage
    Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania)
    Orthologs
    all
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    Genomic context

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    See PF3D7_1123900 in Genome Data Viewer
    Location:
    chromosome: 11
    Exon count:
    3
    Sequence:
    Chromosome: 11; NC_037282.1 (945470..946148)

    Chromosome 11 - NC_037282.1Genomic Context describing neighboring genes Neighboring gene mitochondrial ribosomal protein L37, putative Neighboring gene structural maintenance of chromosomes protein 5, putative Neighboring gene endoplasmic reticulum oxidoreductin, putative Neighboring gene BEACH domain-containing protein, putative

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037282.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Identification of Plasmodium falciparum nuclear proteins by mass spectrometry and proposed protein annotation. Briquet S, et al. PLoS One, 2018. PMID 30379851, Free PMC Article
    2. Organellar proteomics reveals hundreds of novel nuclear proteins in the malaria parasite Plasmodium falciparum. Oehring SC, et al. Genome Biol, 2012 Nov 26. PMID 23181666, Free PMC Article
    3. A protein interaction network of the malaria parasite Plasmodium falciparum. LaCount DJ, et al. Nature, 2005 Nov 3. PMID 16267556
    4. Genome sequence of the human malaria parasite Plasmodium falciparum. Gardner MJ, et al. Nature, 2002 Oct 3. PMID 12368864, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by GeneDB

    Function Evidence Code Pubs
    enables U3 snoRNA binding ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    enables U4 snRNA binding ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within mRNA splicing, via spliceosome ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleolus IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in nucleus HDA PubMed 
    located_in nucleus IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    13 kDa ribonucleoprotein-associated protein, putative

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_037282.1 Reference assembly

      Range
      945470..946148
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001347885.1 → XP_001347921.1  13 kDa ribonucleoprotein-associated protein, putative [Plasmodium falciparum 3D7]

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A024UXG1, A0A024VXC9, A0A024WFP7, A0A024X4Y6, Q8IIC4, W4IF05, W4IS35, W7FAH4, W7FP90, W7KE98
      Conserved Domains (1) summary
      cd21104
      Location:24 → 145
      SNU13; U4/U6.U5 small nuclear ribonucleoprotein SNU13
    Nucleotide Protein
    Heading Accession and Version

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