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    chst2b carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2b [ Danio rerio (zebrafish) ]

    Gene ID: 100006249, updated on 27-Mar-2024

    Summary

    Official Symbol
    chst2bprovided by ZNC
    Official Full Name
    carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2bprovided by ZNC
    Primary source
    ZFIN:ZDB-GENE-060720-33
    See related
    Ensembl:ENSDARG00000058585 AllianceGenome:ZFIN:ZDB-GENE-060720-33
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    wu:fq27b03; si:dkey-105h11.3
    Summary
    Predicted to enable N-acetylglucosamine 6-O-sulfotransferase activity. Predicted to be involved in N-acetylglucosamine metabolic process and sulfur compound metabolic process. Predicted to act upstream of or within carbohydrate metabolic process. Predicted to be located in Golgi membrane. Predicted to be integral component of membrane. Predicted to be active in trans-Golgi network. Is expressed in brain; central nervous system; neural plate; neural rod; and proliferative region. Orthologous to human CHST2 (carbohydrate sulfotransferase 2). [provided by Alliance of Genome Resources, Apr 2022]
    Orthologs
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    Genomic context

    See chst2b in Genome Data Viewer
    Location:
    chromosome: 24
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    106 current GRCz11 (GCF_000002035.6) 24 NC_007135.7 (5784264..5786779, complement)
    105 previous assembly GRCz10 (GCF_000002035.5) 24 NC_007135.6 (5754945..5757424, complement)

    Chromosome 24 - NC_007135.7Genomic Context describing neighboring genes Neighboring gene procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 Neighboring gene divergent protein kinase domain 2Ab Neighboring gene si:dkey-105h11.2 Neighboring gene si:ch211-157j23.2 Neighboring gene NXPE family member 3-like

    Genomic regions, transcripts, and products

    General gene information

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    enables N-acetylglucosamine 6-O-sulfotransferase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables sulfotransferase activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables transferase activity IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    involved_in N-acetylglucosamine metabolic process IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    acts_upstream_of_or_within carbohydrate metabolic process IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in sulfur compound metabolic process IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    located_in Golgi membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     
    is_active_in trans-Golgi network IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    General protein information

    Preferred Names
    carbohydrate sulfotransferase 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007135.7 Reference GRCz11 Primary Assembly

      Range
      5784264..5786779 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001923569.6XP_001923604.2  carbohydrate sulfotransferase 2

      UniProtKB/TrEMBL
      A0A8M1QRB1, K7DYB2
      Related
      ENSDARP00000126440.1, ENSDART00000152069.2
      Conserved Domains (1) summary
      cl21551
      Location:263442
      Sulfotransfer_1; Sulfotransferase domain