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    LOC116435995 alanine aminotransferase 1-like [ Corvus moneduloides (New Caledonian crow) ]

    Gene ID: 116435995, updated on 3-Aug-2024

    Summary

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    Gene symbol
    LOC116435995
    Gene description
    alanine aminotransferase 1-like
    See related
    Ensembl:ENSCMUG00005003732
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Corvus moneduloides
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Corvoidea; Corvidae; Corvus
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    Genomic context

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    See LOC116435995 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    100 current bCorMon1.pri (GCF_009650955.1) 1 NC_045476.1 (165728902..165738215)

    Chromosome 1 - NC_045476.1Genomic Context describing neighboring genes Neighboring gene leucine rich repeat containing 14 Neighboring gene RecQ like helicase 4 Neighboring gene alanine aminotransferase 1-like Neighboring gene alanine aminotransferase 2-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_045476.1 Chromosome 1 Reference bCorMon1.pri

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables L-alanine:2-oxoglutarate aminotransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables pyridoxal phosphate binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    alanine aminotransferase 1-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Corvus moneduloides Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bCorMon1.pri

    Genomic

    1. NC_045476.1 Reference bCorMon1.pri

      Range
      165728902..165738215
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_032092806.1 → XP_031948697.1  alanine aminotransferase 1-like isoform X3

      Conserved Domains (1) summary
      PTZ00377
      Location:79 → 424
      PTZ00377; alanine aminotransferase; Provisional

    2. XM_032092817.1 → XP_031948708.1  alanine aminotransferase 1-like isoform X4

      UniProtKB/TrEMBL
      A0A8C3E195, A0A8U7MI97
      Related
      ENSCMUP00005006289.1, ENSCMUT00005006790.1
      Conserved Domains (1) summary
      PTZ00377
      Location:79 → 458
      PTZ00377; alanine aminotransferase; Provisional

    3. XM_032092828.1 → XP_031948719.1  alanine aminotransferase 1-like isoform X5

      Conserved Domains (1) summary
      PTZ00377
      Location:79 → 432
      PTZ00377; alanine aminotransferase; Provisional

    4. XM_032092788.1 → XP_031948679.1  alanine aminotransferase 1-like isoform X1

      Conserved Domains (1) summary
      PTZ00377
      Location:79 → 424
      PTZ00377; alanine aminotransferase; Provisional

    5. XM_032092797.1 → XP_031948688.1  alanine aminotransferase 1-like isoform X2

      Conserved Domains (1) summary
      PTZ00377
      Location:76 → 421
      PTZ00377; alanine aminotransferase; Provisional
    Nucleotide Protein
    Heading Accession and Version

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