U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Nucleotide

    • Showing Current items.

    ANKZF1 ankyrin repeat and zinc finger peptidyl tRNA hydrolase 1 [ Parus major (Great Tit) ]

    Gene ID: 107207621, updated on 3-Aug-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    ANKZF1
    Gene description
    ankyrin repeat and zinc finger peptidyl tRNA hydrolase 1
    See related
    Ensembl:ENSPMJG00000019715
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Parus major
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Paridae; Parus
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See ANKZF1 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    18
    Annotation release Status Assembly Chr Location
    102 current Parus_major1.1 (GCF_001522545.3) 7 NC_031776.1 (21994207..22003923, complement)
    100 previous assembly Parus_major1.0.3 (GCF_001522545.1) 7 NC_029276.1 (21997301..22003925, complement)

    Chromosome 7 - NC_031776.1Genomic Context describing neighboring genes Neighboring gene DnaJ heat shock protein family (Hsp40) member B2 Neighboring gene tubulin alpha 4a Neighboring gene serine/threonine kinase 16 Neighboring gene galactosidase beta 1 like Neighboring gene uncharacterized LOC117244700 Neighboring gene autophagy related 9A Neighboring gene ATP binding cassette subfamily B member 6 (LAN blood group) Neighboring gene zinc finger AN1-type containing 2B

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    ankyrin repeat and zinc finger domain-containing protein 1
    Names
    ankyrin repeat and zinc finger domain containing 1

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Parus major Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Parus_major1.1 Primary Assembly

    Genomic

    1. NC_031776.1 Reference Parus_major1.1 Primary Assembly

      Range
      21994207..22003923 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_033516246.1 → XP_033372137.1  ankyrin repeat and zinc finger domain-containing protein 1 isoform X3

      Conserved Domains (5) summary
      PTZ00322
      Location:523 → 599
      PTZ00322; 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
      sd00020
      Location:64 → 86
      ZF_C2H2; C2H2 Zn finger [structural motif]
      sd00045
      Location:475 → 524
      ANK; ANK repeat [structural motif]
      pfam12796
      Location:478 → 557
      Ank_2; Ankyrin repeats (3 copies)
      pfam18826
      Location:195 → 339
      bVLRF1; bacteroidetes VLRF1 release factor

    2. XM_015635084.3 → XP_015490570.1  ankyrin repeat and zinc finger domain-containing protein 1 isoform X1

      Related
      ENSPMJP00000027043.1, ENSPMJT00000034780.1
      Conserved Domains (5) summary
      cd00204
      Location:477 → 570
      ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
      sd00020
      Location:64 → 86
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam12796
      Location:478 → 557
      Ank_2; Ankyrin repeats (3 copies)
      sd00045
      Location:475 → 524
      ANK; ANK repeat [structural motif]
      cl00909
      Location:669 → 701
      Ribosomal_L24e_L24; Ribosomal protein L24e/L24 is a ribosomal protein found in eukaryotes (L24) and in archaea (L24e, distinct from archaeal L24). L24e/L24 is located on the surface of the large subunit, adjacent to proteins L14 and L3, and near the translation factor ...

    3. XM_015635083.3 → XP_015490569.1  ankyrin repeat and zinc finger domain-containing protein 1 isoform X1

      Conserved Domains (5) summary
      cd00204
      Location:477 → 570
      ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
      sd00020
      Location:64 → 86
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam12796
      Location:478 → 557
      Ank_2; Ankyrin repeats (3 copies)
      sd00045
      Location:475 → 524
      ANK; ANK repeat [structural motif]
      cl00909
      Location:669 → 701
      Ribosomal_L24e_L24; Ribosomal protein L24e/L24 is a ribosomal protein found in eukaryotes (L24) and in archaea (L24e, distinct from archaeal L24). L24e/L24 is located on the surface of the large subunit, adjacent to proteins L14 and L3, and near the translation factor ...

    4. XM_019007528.2 → XP_018863073.1  ankyrin repeat and zinc finger domain-containing protein 1 isoform X2

    5. XM_019007530.2 → XP_018863075.1  ankyrin repeat and zinc finger domain-containing protein 1 isoform X5

    6. XM_019007529.2 → XP_018863074.1  ankyrin repeat and zinc finger domain-containing protein 1 isoform X4

    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.