U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Nucleotide

    • Showing Current items.

    LOC115450451 protein VAC14 homolog [ Manduca sexta (tobacco hornworm) ]

    Gene ID: 115450451, updated on 14-Dec-2023

    Summary

    Go to the top of the page Help
    Gene symbol
    LOC115450451
    Gene description
    protein VAC14 homolog
    See related
    EnsemblRapid:ENSMSXG00000013684
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Manduca sexta
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Lepidoptera; Glossata; Ditrysia; Bombycoidea; Sphingidae; Sphinginae; Sphingini; Manduca
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See LOC115450451 in Genome Data Viewer
    Location:
    chromosome: 16
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    102 current JHU_Msex_v1.0 (GCF_014839805.1) 16 NC_051130.1 (13199174..13210636)
    100 previous assembly Msex_1.0 (GCF_000262585.1) Unplaced Scaffold NW_021942393.1 (7..10856, complement)

    Chromosome 16 - NC_051130.1Genomic Context describing neighboring genes Neighboring gene dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1-like Neighboring gene E3 ubiquitin-protein ligase AMFR Neighboring gene uncharacterized LOC119189468 Neighboring gene serine/threonine-protein kinase TBK1 Neighboring gene cactin

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in phosphatidylinositol biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of PAS complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in endosome membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    protein VAC14 homolog

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Manduca sexta Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference JHU_Msex_v1.0 Primary Assembly

    Genomic

    1. NC_051130.1 Reference JHU_Msex_v1.0 Primary Assembly

      Range
      13199174..13210636
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_037439174.1 → XP_037295071.1  protein VAC14 homolog

      UniProtKB/TrEMBL
      A0A922CWS5
      Related
      ENSMSXP00000019559.1, ENSMSXT00000022538.1
      Conserved Domains (3) summary
      sd00044
      Location:51 → 80
      HEAT; HEAT repeat [structural motif]
      pfam11916
      Location:465 → 643
      Vac14_Fig4_bd; Vacuolar protein 14 C-terminal Fig4p binding
      pfam12755
      Location:66 → 162
      Vac14_Fab1_bd; Vacuolar 14 Fab1-binding region
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases