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    TTC31 tetratricopeptide repeat domain 31 [ Canis lupus familiaris (dog) ]

    Gene ID: 475786, updated on 17-Aug-2024

    Summary

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    Official Symbol
    TTC31provided by VGNC
    Official Full Name
    tetratricopeptide repeat domain 31provided by VGNC
    Primary source
    VGNC:VGNC:47951
    See related
    Ensembl:ENSCAFG00845018926
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human all
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    Genomic context

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    See TTC31 in Genome Data Viewer
    Location:
    chromosome: 17
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 17 NC_051821.1 (49505656..49514676, complement)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 17 NC_006599.4 (48289624..48297321, complement)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 17 NC_049238.1 (49147247..49156265, complement)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 17 NC_049277.1 (48522779..48531802, complement)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 17 NC_049758.1 (48589530..48598563, complement)

    Chromosome 17 - NC_051821.1Genomic Context describing neighboring genes Neighboring gene T cell leukemia homeobox 2 Neighboring gene polycomb group ring finger 1 Neighboring gene uncharacterized LOC119869720 Neighboring gene ladybird homeobox 2 Neighboring gene coiled-coil domain containing 142 Neighboring gene mitochondrial ribosomal protein L53 Neighboring gene mannosyl-oligosaccharide glucosidase

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    tetratricopeptide repeat protein 31

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051821.1 Reference ROS_Cfam_1.0

      Range
      49505656..49514676 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038691659.1 → XP_038547587.1  tetratricopeptide repeat protein 31 isoform X3

      UniProtKB/TrEMBL
      A0A8C0KJT6, A0A8C0QF61, A0A8I3P2Y6, A0A8P0SDI8
      Related
      ENSCAFP00845026169.1, ENSCAFT00845033427.1
      Conserved Domains (2) summary
      PLN03088
      Location:321 → 460
      PLN03088; SGT1, suppressor of G2 allele of SKP1; Provisional
      sd00006
      Location:305 → 333
      TPR; TPR repeat [structural motif]

    2. XM_038691658.1 → XP_038547586.1  tetratricopeptide repeat protein 31 isoform X2

      Conserved Domains (2) summary
      PLN03088
      Location:326 → 464
      PLN03088; SGT1, suppressor of G2 allele of SKP1; Provisional
      sd00006
      Location:310 → 338
      TPR; TPR repeat [structural motif]

    3. XM_038691657.1 → XP_038547585.1  tetratricopeptide repeat protein 31 isoform X1

      UniProtKB/TrEMBL
      A0A8C0RNU2
      Conserved Domains (2) summary
      PLN03088
      Location:326 → 465
      PLN03088; SGT1, suppressor of G2 allele of SKP1; Provisional
      sd00006
      Location:310 → 338
      TPR; TPR repeat [structural motif]

    4. XM_038691662.1 → XP_038547590.1  tetratricopeptide repeat protein 31 isoform X5

      UniProtKB/TrEMBL
      A0A8P0SDI8
      Conserved Domains (2) summary
      PLN03088
      Location:232 → 371
      PLN03088; SGT1, suppressor of G2 allele of SKP1; Provisional
      sd00006
      Location:216 → 244
      TPR; TPR repeat [structural motif]

    5. XM_038691661.1 → XP_038547589.1  tetratricopeptide repeat protein 31 isoform X5

      UniProtKB/TrEMBL
      A0A8P0SDI8
      Conserved Domains (2) summary
      PLN03088
      Location:232 → 371
      PLN03088; SGT1, suppressor of G2 allele of SKP1; Provisional
      sd00006
      Location:216 → 244
      TPR; TPR repeat [structural motif]

    6. XM_038691660.1 → XP_038547588.1  tetratricopeptide repeat protein 31 isoform X4

      UniProtKB/TrEMBL
      A0A8P0SDI8
      Conserved Domains (2) summary
      PLN03088
      Location:302 → 441
      PLN03088; SGT1, suppressor of G2 allele of SKP1; Provisional
      sd00006
      Location:286 → 314
      TPR; TPR repeat [structural motif]

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049277.1 Alternate UMICH_Zoey_3.1

      Range
      48522779..48531802 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038499100.1 → XP_038355028.1  tetratricopeptide repeat protein 31 isoform X3

      Conserved Domains (2) summary
      PLN03088
      Location:321 → 460
      PLN03088; SGT1, suppressor of G2 allele of SKP1; Provisional
      sd00006
      Location:305 → 333
      TPR; TPR repeat [structural motif]

    2. XM_038499099.1 → XP_038355027.1  tetratricopeptide repeat protein 31 isoform X2

      Conserved Domains (2) summary
      PLN03088
      Location:326 → 464
      PLN03088; SGT1, suppressor of G2 allele of SKP1; Provisional
      sd00006
      Location:310 → 338
      TPR; TPR repeat [structural motif]

    3. XM_038499098.1 → XP_038355026.1  tetratricopeptide repeat protein 31 isoform X1

      Conserved Domains (2) summary
      PLN03088
      Location:326 → 465
      PLN03088; SGT1, suppressor of G2 allele of SKP1; Provisional
      sd00006
      Location:310 → 338
      TPR; TPR repeat [structural motif]

    4. XM_038499103.1 → XP_038355031.1  tetratricopeptide repeat protein 31 isoform X5

      Conserved Domains (2) summary
      PLN03088
      Location:232 → 371
      PLN03088; SGT1, suppressor of G2 allele of SKP1; Provisional
      sd00006
      Location:216 → 244
      TPR; TPR repeat [structural motif]

    5. XM_038499102.1 → XP_038355030.1  tetratricopeptide repeat protein 31 isoform X5

      Conserved Domains (2) summary
      PLN03088
      Location:232 → 371
      PLN03088; SGT1, suppressor of G2 allele of SKP1; Provisional
      sd00006
      Location:216 → 244
      TPR; TPR repeat [structural motif]

    6. XM_038499101.1 → XP_038355029.1  tetratricopeptide repeat protein 31 isoform X4

      Conserved Domains (2) summary
      PLN03088
      Location:302 → 441
      PLN03088; SGT1, suppressor of G2 allele of SKP1; Provisional
      sd00006
      Location:286 → 314
      TPR; TPR repeat [structural motif]

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049758.1 Alternate UNSW_CanFamBas_1.0

      Range
      48589530..48598563 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038625730.1 → XP_038481658.1  tetratricopeptide repeat protein 31 isoform X3

      Conserved Domains (2) summary
      PLN03088
      Location:321 → 460
      PLN03088; SGT1, suppressor of G2 allele of SKP1; Provisional
      sd00006
      Location:305 → 333
      TPR; TPR repeat [structural motif]

    2. XM_038625729.1 → XP_038481657.1  tetratricopeptide repeat protein 31 isoform X2

      Conserved Domains (2) summary
      PLN03088
      Location:326 → 464
      PLN03088; SGT1, suppressor of G2 allele of SKP1; Provisional
      sd00006
      Location:310 → 338
      TPR; TPR repeat [structural motif]

    3. XM_038625728.1 → XP_038481656.1  tetratricopeptide repeat protein 31 isoform X1

      Conserved Domains (2) summary
      PLN03088
      Location:326 → 465
      PLN03088; SGT1, suppressor of G2 allele of SKP1; Provisional
      sd00006
      Location:310 → 338
      TPR; TPR repeat [structural motif]

    4. XM_038625733.1 → XP_038481661.1  tetratricopeptide repeat protein 31 isoform X5

      Conserved Domains (2) summary
      PLN03088
      Location:232 → 371
      PLN03088; SGT1, suppressor of G2 allele of SKP1; Provisional
      sd00006
      Location:216 → 244
      TPR; TPR repeat [structural motif]

    5. XM_038625732.1 → XP_038481660.1  tetratricopeptide repeat protein 31 isoform X5

      Conserved Domains (2) summary
      PLN03088
      Location:232 → 371
      PLN03088; SGT1, suppressor of G2 allele of SKP1; Provisional
      sd00006
      Location:216 → 244
      TPR; TPR repeat [structural motif]

    6. XM_038625731.1 → XP_038481659.1  tetratricopeptide repeat protein 31 isoform X4

      Conserved Domains (2) summary
      PLN03088
      Location:302 → 441
      PLN03088; SGT1, suppressor of G2 allele of SKP1; Provisional
      sd00006
      Location:286 → 314
      TPR; TPR repeat [structural motif]

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049238.1 Alternate UU_Cfam_GSD_1.0

      Range
      49147247..49156265 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038561687.1 → XP_038417615.1  tetratricopeptide repeat protein 31 isoform X3

      UniProtKB/TrEMBL
      A0A8C0KJT6, A0A8C0QF61, A0A8I3P2Y6, A0A8P0SDI8
      Conserved Domains (2) summary
      PLN03088
      Location:321 → 460
      PLN03088; SGT1, suppressor of G2 allele of SKP1; Provisional
      sd00006
      Location:305 → 333
      TPR; TPR repeat [structural motif]

    2. XM_038561686.1 → XP_038417614.1  tetratricopeptide repeat protein 31 isoform X2

      Conserved Domains (2) summary
      PLN03088
      Location:326 → 464
      PLN03088; SGT1, suppressor of G2 allele of SKP1; Provisional
      sd00006
      Location:310 → 338
      TPR; TPR repeat [structural motif]

    3. XM_038561685.1 → XP_038417613.1  tetratricopeptide repeat protein 31 isoform X1

      UniProtKB/TrEMBL
      A0A8C0RNU2
      Conserved Domains (2) summary
      PLN03088
      Location:326 → 465
      PLN03088; SGT1, suppressor of G2 allele of SKP1; Provisional
      sd00006
      Location:310 → 338
      TPR; TPR repeat [structural motif]

    4. XM_038561690.1 → XP_038417618.1  tetratricopeptide repeat protein 31 isoform X5

      UniProtKB/TrEMBL
      A0A8P0SDI8
      Conserved Domains (2) summary
      PLN03088
      Location:232 → 371
      PLN03088; SGT1, suppressor of G2 allele of SKP1; Provisional
      sd00006
      Location:216 → 244
      TPR; TPR repeat [structural motif]

    5. XM_038561689.1 → XP_038417617.1  tetratricopeptide repeat protein 31 isoform X5

      UniProtKB/TrEMBL
      A0A8P0SDI8
      Conserved Domains (2) summary
      PLN03088
      Location:232 → 371
      PLN03088; SGT1, suppressor of G2 allele of SKP1; Provisional
      sd00006
      Location:216 → 244
      TPR; TPR repeat [structural motif]

    6. XM_038561688.1 → XP_038417616.1  tetratricopeptide repeat protein 31 isoform X4

      UniProtKB/TrEMBL
      A0A8P0SDI8
      Conserved Domains (2) summary
      PLN03088
      Location:302 → 441
      PLN03088; SGT1, suppressor of G2 allele of SKP1; Provisional
      sd00006
      Location:286 → 314
      TPR; TPR repeat [structural motif]

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006599.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      48289624..48297321 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005630532.4 → XP_005630589.1  tetratricopeptide repeat protein 31 isoform X3

      UniProtKB/TrEMBL
      A0A8C0KJT6, A0A8C0QF61, A0A8I3P2Y6, A0A8P0SDI8
      Conserved Domains (2) summary
      PLN03088
      Location:321 → 460
      PLN03088; SGT1, suppressor of G2 allele of SKP1; Provisional
      sd00006
      Location:305 → 333
      TPR; TPR repeat [structural motif]

    2. XM_014120331.3 → XP_013975806.1  tetratricopeptide repeat protein 31 isoform X2

      Conserved Domains (2) summary
      PLN03088
      Location:326 → 464
      PLN03088; SGT1, suppressor of G2 allele of SKP1; Provisional
      sd00006
      Location:310 → 338
      TPR; TPR repeat [structural motif]

    3. XM_022404792.2 → XP_022260500.1  tetratricopeptide repeat protein 31 isoform X1

      UniProtKB/TrEMBL
      A0A8C0RNU2
      Conserved Domains (2) summary
      PLN03088
      Location:326 → 465
      PLN03088; SGT1, suppressor of G2 allele of SKP1; Provisional
      sd00006
      Location:310 → 338
      TPR; TPR repeat [structural motif]

    4. XM_022404795.2 → XP_022260503.1  tetratricopeptide repeat protein 31 isoform X5

      UniProtKB/TrEMBL
      A0A8P0SDI8
      Conserved Domains (2) summary
      PLN03088
      Location:232 → 371
      PLN03088; SGT1, suppressor of G2 allele of SKP1; Provisional
      sd00006
      Location:216 → 244
      TPR; TPR repeat [structural motif]

    5. XM_022404794.2 → XP_022260502.1  tetratricopeptide repeat protein 31 isoform X5

      UniProtKB/TrEMBL
      A0A8P0SDI8
      Conserved Domains (2) summary
      PLN03088
      Location:232 → 371
      PLN03088; SGT1, suppressor of G2 allele of SKP1; Provisional
      sd00006
      Location:216 → 244
      TPR; TPR repeat [structural motif]

    6. XM_022404793.2 → XP_022260501.1  tetratricopeptide repeat protein 31 isoform X4

      UniProtKB/TrEMBL
      A0A8P0SDI8
      Conserved Domains (2) summary
      PLN03088
      Location:302 → 441
      PLN03088; SGT1, suppressor of G2 allele of SKP1; Provisional
      sd00006
      Location:286 → 314
      TPR; TPR repeat [structural motif]
    Nucleotide Protein
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