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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001305077.2 → NP_001292006.1 alpha/beta-tubulin-N-acetyltransferase 9 isoform 2
See identical proteins and their annotated locations for NP_001292006.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) uses an alternate in-frame splice site in an internal exon, compared to variant 1. This variant encodes isoform 2, which is shorter than isoform 1.
- Source sequence(s)
-
AC016888, BC004225, DA259097, HY222854
- Consensus CDS
-
CCDS77102.1
- UniProtKB/TrEMBL
-
J3QRL7
- Related
- ENSP00000462019.1, ENST00000580301.5
- Conserved Domains (1) summary
-
- pfam13302
Location:14 → 161
- Acetyltransf_3; Acetyltransferase (GNAT) domain
-
NM_001305078.2 → NP_001292007.1 alpha/beta-tubulin-N-acetyltransferase 9 isoform 1
See identical proteins and their annotated locations for NP_001292007.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (3) differs in the 5' UTR compared to variant 1. Both variants 1 and 3 encode the same protein (isoform 1).
- Source sequence(s)
-
BC004195, BP231776, HY222854
- Consensus CDS
-
CCDS11706.1
- UniProtKB/Swiss-Prot
- B2R7F0, Q9BTD0, Q9BTE0, Q9Y3T3
- UniProtKB/TrEMBL
-
J3QRL7
- Conserved Domains (2) summary
-
- pfam00583
Location:88 → 162
- Acetyltransf_1; Acetyltransferase (GNAT) family
- pfam13302
Location:13 → 162
- Acetyltransf_3; Acetyltransferase (GNAT) domain
-
NM_001305079.2 → NP_001292008.1 alpha/beta-tubulin-N-acetyltransferase 9 isoform 3
Status: VALIDATED
- Description
- Transcript Variant: This variant (4) uses an alternate splice site in the 3' coding region, which results in a frameshift, compared to variant 1. It encodes isoform 3, which has a shorter and distinct C-terminus, compared to isoform 1.
- Source sequence(s)
-
BC004195, BP197633, DA259097, HY222854
- Consensus CDS
-
CCDS77104.1
- UniProtKB/TrEMBL
- J3QL33, J3QQR6
- Related
- ENSP00000463353.1, ENST00000583476.5
- Conserved Domains (1) summary
-
- pfam13302
Location:13 → 131
- Acetyltransf_3; Acetyltransferase (GNAT) domain
-
NM_001305080.2 → NP_001292009.1 alpha/beta-tubulin-N-acetyltransferase 9 isoform 4
Status: VALIDATED
- Description
- Transcript Variant: This variant (5) uses an alternate in-frame splice site in the 3' coding region, compared to variant 1. This results in a shorter protein (isoform 4), compared to isoform 1.
- Source sequence(s)
-
BC004195, BM909550, DA259097, HY222854
- Consensus CDS
-
CCDS82199.1
- UniProtKB/TrEMBL
- J3QQP3, J3QRL7
- Related
- ENSP00000463824.1, ENST00000581136.5
- Conserved Domains (2) summary
-
- pfam00583
Location:88 → 157
- Acetyltransf_1; Acetyltransferase (GNAT) family
- pfam13302
Location:13 → 157
- Acetyltransf_3; Acetyltransferase (GNAT) domain
-
NM_001305081.2 → NP_001292010.1 alpha/beta-tubulin-N-acetyltransferase 9 isoform 5
Status: VALIDATED
- Description
- Transcript Variant: This variant (6) uses alternate in-frame splice sites in two exons, compared to variant 1. This results in a shorter protein (isoform 5), compared to isoform 1.
- Source sequence(s)
-
BC004195, BU159218, DA259097, HY222854
- UniProtKB/TrEMBL
-
J3QRL7
- Conserved Domains (2) summary
-
- pfam00583
Location:87 → 160
- Acetyltransf_1; Acetyltransferase (GNAT) family
- pfam13302
Location:13 → 160
- Acetyltransf_3; Acetyltransferase (GNAT) domain
-
NM_001305082.2 → NP_001292011.1 alpha/beta-tubulin-N-acetyltransferase 9 isoform 6
Status: VALIDATED
- Description
- Transcript Variant: This variant (7) uses an alternate splice site in the 5' UTR, and initiates translation at an alternate start codon, compared to variant 1. The encoded isoform (6) has a distinct N-terminus and is longer than isoform 1.
- Source sequence(s)
-
AL537925, BC004195, DA259097, HY222854
- Consensus CDS
-
CCDS82200.1
- UniProtKB/TrEMBL
- J3KT72, J3QRL7
- Related
- ENSP00000462835.1, ENST00000578822.5
- Conserved Domains (2) summary
-
- pfam00583
Location:93 → 167
- Acetyltransf_1; Acetyltransferase (GNAT) family
- pfam13302
Location:18 → 167
- Acetyltransf_3; Acetyltransferase (GNAT) domain
-
NM_001305083.2 → NP_001292012.1 alpha/beta-tubulin-N-acetyltransferase 9 isoform 7
Status: VALIDATED
- Description
- Transcript Variant: This variant (8) uses alternate in-frame splice sites in two exons, compared to variant 1. This results in a shorter protein (isoform 7), compared to isoform 1.
- Source sequence(s)
-
BC004195, DA259097, HY222854
- UniProtKB/TrEMBL
-
J3QRL7
- Conserved Domains (2) summary
-
- pfam00583
Location:87 → 156
- Acetyltransf_1; Acetyltransferase (GNAT) family
- pfam13302
Location:13 → 156
- Acetyltransf_3; Acetyltransferase (GNAT) domain
-
NM_001305084.3 → NP_001292013.1 alpha/beta-tubulin-N-acetyltransferase 9 isoform 8
Status: VALIDATED
- Description
- Transcript Variant: This variant (9) lacks an exon and uses an alternate splice site in the 3'-most exon resulting in a translational frameshift, compared to variant 1. This variant encodes isoform 8 which is shorter and has a distinct C-terminus compared to isoform 1.
- Source sequence(s)
-
BC004195, DA010490
- Consensus CDS
-
CCDS77103.1
- UniProtKB/TrEMBL
-
J3KRQ7
- Related
- ENSP00000462120.1, ENST00000582524.5
- Conserved Domains (1) summary
-
- pfam13302
Location:14 → 132
- Acetyltransf_3; Acetyltransferase (GNAT) domain
-
NM_001305085.3 → NP_001292014.1 alpha/beta-tubulin-N-acetyltransferase 9 isoform 9
See identical proteins and their annotated locations for NP_001292014.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (10) has multiple differences in the coding region, one of which results in a translational frameshift, compared to variant 1. The resulting protein (isoform 9) has a distinct C-terminus and is shorter than isoform 1.
- Source sequence(s)
-
BC004195, DA259097, DB171198
- Consensus CDS
-
CCDS77101.1
- UniProtKB/TrEMBL
-
J3KSE9
- Related
- ENSP00000462454.1, ENST00000583757.5
- Conserved Domains (1) summary
-
- pfam13302
Location:14 → 131
- Acetyltransf_3; Acetyltransferase (GNAT) domain
-
NM_001305086.2 → NP_001292015.1 alpha/beta-tubulin-N-acetyltransferase 9 isoform 10
Status: VALIDATED
- Description
- Transcript Variant: This variant (11) uses an alternate in-frame splice site in an internal exon and lacks an exon in the 3' coding region resulting in a translational frameshift, compared to variant 1. It encodes isoform 10 which has a distinct C-terminus and is shorter than isoform 1.
- Source sequence(s)
-
AC016888, BC004195, BX333236, DA259097, HY222854
- UniProtKB/Swiss-Prot
-
Q9BTE0
- Related
-
ENST00000583834.5
- Conserved Domains (1) summary
-
- pfam13302
Location:13 → 131
- Acetyltransf_3; Acetyltransferase (GNAT) domain
-
NM_001305087.3 → NP_001292016.1 alpha/beta-tubulin-N-acetyltransferase 9 isoform 11
Status: VALIDATED
- Description
- Transcript Variant: This variant (12) has multiple differences in the coding region and uses a downstream start codon, compared to variant 1. The resulting protein (isoform 11) has distinct N and C-termini and is shorter than isoform 1.
- Source sequence(s)
-
AC016888, BC004195, BG702300, DA259097
- UniProtKB/Swiss-Prot
-
Q9BTE0
- Conserved Domains (1) summary
-
- pfam13302
Location:3 → 107
- Acetyltransf_3; Acetyltransferase (GNAT) domain
-
NM_001305088.2 → NP_001292017.1 alpha/beta-tubulin-N-acetyltransferase 9 isoform 12
Status: VALIDATED
- Description
- Transcript Variant: This variant (13) has multiple differences in the coding region and uses a downstream start codon, compared to variant 1. The resulting protein (isoform 12) is shorter than isoform 1, has a shorter N-terminus and a distinct C-terminus.
- Source sequence(s)
-
AC016888, BC004195, BQ068039, DA259097, HY222854
- UniProtKB/Swiss-Prot
-
Q9BTE0
- Conserved Domains (1) summary
-
- pfam13302
Location:14 → 100
- Acetyltransf_3; Acetyltransferase (GNAT) domain
-
NM_015654.5 → NP_056469.2 alpha/beta-tubulin-N-acetyltransferase 9 isoform 1
See identical proteins and their annotated locations for NP_056469.2
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) encodes isoform 1.
- Source sequence(s)
-
BC004195, DA259097, HY222854
- Consensus CDS
-
CCDS11706.1
- UniProtKB/Swiss-Prot
- B2R7F0, Q9BTD0, Q9BTE0, Q9Y3T3
- UniProtKB/TrEMBL
-
J3QRL7
- Related
- ENSP00000350467.3, ENST00000357814.8
- Conserved Domains (2) summary
-
- pfam00583
Location:88 → 162
- Acetyltransf_1; Acetyltransferase (GNAT) family
- pfam13302
Location:13 → 162
- Acetyltransf_3; Acetyltransferase (GNAT) domain
RNA
-
NR_130953.2 RNA Sequence
Status: VALIDATED
- Description
- Transcript Variant: This variant (14) contains an alternate internal exon, compared to variant 1. This variant is represented as non-coding because the use of the 5'-most expected translational start codon, as used in variant 1, renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
BC004195, BI821280, DA259097, HY222854
-
NR_130954.3 RNA Sequence
Status: VALIDATED
- Description
- Transcript Variant: This variant (15) contains an alternate internal exon and uses an alternate splice site in the 3'-most exon, compared to variant 1. This variant is represented as non-coding because the use of the 5'-most expected translational start codon, as used in variant 1, renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
BC004195, BM464121, DA259097