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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001085423.2 → NP_001078892.1 allergin-1 isoform Allergin-1L precursor
Status: VALIDATED
- Description
- Transcript Variant: This variant (L) represents the longest transcript and encodes the longest isoform (Allergin-1L, also known as long form).
- Source sequence(s)
-
BC053534, BE296352, CD687595
- Consensus CDS
-
CCDS74133.1
- UniProtKB/Swiss-Prot
- A1L458, B4DUS1, B7ZM50, B9EGN0, D6RUW6, D6RUW8, Q7Z6M3
- Related
- ENSP00000482801.1, ENST00000619286.5
- Conserved Domains (2) summary
-
- pfam13895
Location:37 → 121
- Ig_2; Immunoglobulin domain
- pfam13927
Location:128 → 200
- Ig_3; Immunoglobulin domain
-
NM_001291316.2 → NP_001278245.1 allergin-1 isoform Allergin-1S1 precursor
Status: VALIDATED
- Description
- Transcript Variant: This variant (S1) lacks an alternate in-frame exon in the central coding region, compared to variant L, resulting in an isoform (Allergin-1S1, also known as short form 1) that is shorter than isoform Allergin-1L.
- Source sequence(s)
-
AC234063
- Consensus CDS
-
CCDS77087.1
- UniProtKB/Swiss-Prot
-
Q7Z6M3
- Conserved Domains (1) summary
-
- pfam13895
Location:37 → 121
- Ig_2; Immunoglobulin domain
-
NM_001291317.2 → NP_001278246.1 allergin-1 isoform Allergin-1S2 precursor
Status: VALIDATED
- Description
- Transcript Variant: This variant (S2) lacks an alternate in-frame exon in the 5' coding region, compared to variant L, resulting in an isoform (Allergin-1S2, also known as short form 2) that is shorter than isoform Allergin-1L.
- Source sequence(s)
-
AC234063
- Consensus CDS
-
CCDS77088.1
- UniProtKB/Swiss-Prot
-
Q7Z6M3
- Related
- ENSP00000477504.1, ENST00000612535.4
- Conserved Domains (1) summary
-
- pfam13927
Location:38 → 110
- Ig_3; Immunoglobulin domain
-
NM_001369493.1 → NP_001356422.1 allergin-1 isoform Allergin-1L precursor
Status: VALIDATED
- Source sequence(s)
-
AC234063
- Consensus CDS
-
CCDS74133.1
- UniProtKB/Swiss-Prot
- A1L458, B4DUS1, B7ZM50, B9EGN0, D6RUW6, D6RUW8, Q7Z6M3
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000017.11 Reference GRCh38.p14 Primary Assembly
- Range
-
64449115..64497356
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_024450708.2 → XP_024306476.2 allergin-1 isoform X2
- UniProtKB/Swiss-Prot
- A1L458, B4DUS1, B7ZM50, B9EGN0, D6RUW6, D6RUW8, Q7Z6M3
-
XM_047435791.1 → XP_047291747.1 allergin-1 isoform X2
- UniProtKB/Swiss-Prot
- A1L458, B4DUS1, B7ZM50, B9EGN0, D6RUW6, D6RUW8, Q7Z6M3
-
XM_024450707.2 → XP_024306475.2 allergin-1 isoform X2
- UniProtKB/Swiss-Prot
- A1L458, B4DUS1, B7ZM50, B9EGN0, D6RUW6, D6RUW8, Q7Z6M3
-
XM_047435790.1 → XP_047291746.1 allergin-1 isoform X2
- UniProtKB/Swiss-Prot
- A1L458, B4DUS1, B7ZM50, B9EGN0, D6RUW6, D6RUW8, Q7Z6M3
- Related
- ENSP00000480749.1, ENST00000615220.4
-
XM_047435789.1 → XP_047291745.1 allergin-1 isoform X1
-
XM_047435792.1 → XP_047291748.1 allergin-1 isoform X3
-
XM_047435793.1 → XP_047291749.1 allergin-1 isoform X4
- Related
- ENSP00000481318.1, ENST00000616498.4
RNA
-
XR_002957990.2 RNA Sequence
-
XR_002957989.2 RNA Sequence
Alternate T2T-CHM13v2.0
Genomic
-
NC_060941.1 Alternate T2T-CHM13v2.0
- Range
-
65318873..65366741
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054315770.1 → XP_054171745.1 allergin-1 isoform X2
- UniProtKB/Swiss-Prot
- A1L458, B4DUS1, B7ZM50, B9EGN0, D6RUW6, D6RUW8, Q7Z6M3
-
XM_054315769.1 → XP_054171744.1 allergin-1 isoform X2
- UniProtKB/Swiss-Prot
- A1L458, B4DUS1, B7ZM50, B9EGN0, D6RUW6, D6RUW8, Q7Z6M3
-
XM_054315768.1 → XP_054171743.1 allergin-1 isoform X2
- UniProtKB/Swiss-Prot
- A1L458, B4DUS1, B7ZM50, B9EGN0, D6RUW6, D6RUW8, Q7Z6M3
-
XM_054315771.1 → XP_054171746.1 allergin-1 isoform X2
- UniProtKB/Swiss-Prot
- A1L458, B4DUS1, B7ZM50, B9EGN0, D6RUW6, D6RUW8, Q7Z6M3
-
XM_054315767.1 → XP_054171742.1 allergin-1 isoform X2
- UniProtKB/Swiss-Prot
- A1L458, B4DUS1, B7ZM50, B9EGN0, D6RUW6, D6RUW8, Q7Z6M3
-
XM_054315766.1 → XP_054171741.1 allergin-1 isoform X1
-
XM_054315772.1 → XP_054171747.1 allergin-1 isoform X3
-
XM_054315773.1 → XP_054171748.1 allergin-1 isoform X4
RNA
-
XR_008484810.1 RNA Sequence
-
XR_008484811.1 RNA Sequence