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    praf2 PRA1 domain family, member 2 [ Danio rerio (zebrafish) ]

    Gene ID: 550393, updated on 28-Oct-2024

    Summary

    Official Symbol
    praf2provided by ZNC
    Official Full Name
    PRA1 domain family, member 2provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-050417-190
    See related
    Ensembl:ENSDARG00000032535 AllianceGenome:ZFIN:ZDB-GENE-050417-190
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    im:6893481; zgc:112438
    Summary
    Predicted to be active in membrane. Orthologous to human PRAF2 (PRA1 domain family member 2). [provided by Alliance of Genome Resources, Oct 2024]
    Orthologs
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    Genomic context

    See praf2 in Genome Data Viewer
    Location:
    chromosome: 8
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 8 NC_007119.7 (44893628..44904695, complement)
    105 previous assembly GRCz10 (GCF_000002035.5) 8 NC_007119.6 (44899722..44910789, complement)

    Chromosome 8 - NC_007119.7Genomic Context describing neighboring genes Neighboring gene calcium channel, voltage-dependent, L type, alpha 1F subunit a Neighboring gene uncharacterized LOC103911563 Neighboring gene zgc:154046 Neighboring gene translocase of inner mitochondrial membrane 17 homolog B (yeast)

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    General gene information

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    is_active_in membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001017698.1NP_001017698.1  PRA1 family protein 2

      See identical proteins and their annotated locations for NP_001017698.1

      Status: PROVISIONAL

      Source sequence(s)
      BC093309
      UniProtKB/TrEMBL
      Q561T5
      Related
      ENSDARP00000040803.4, ENSDART00000040804.5
      Conserved Domains (1) summary
      pfam03208
      Location:5149
      PRA1; PRA1 family protein

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007119.7 Reference GRCz11 Primary Assembly

      Range
      44893628..44904695 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)