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    pof1b POF1B actin binding protein [ Danio rerio (zebrafish) ]

    Gene ID: 564098, updated on 2-Nov-2024

    Summary

    Official Symbol
    pof1bprovided by ZNC
    Official Full Name
    POF1B actin binding proteinprovided by ZNC
    Primary source
    ZFIN:ZDB-GENE-030131-4287
    See related
    Ensembl:ENSDARG00000054060 AllianceGenome:ZFIN:ZDB-GENE-030131-4287
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    fc88b11; wu:fa99b01; wu:fc88b11; si:dkeyp-8h9.2
    Summary
    Predicted to enable actin filament binding activity. Predicted to be involved in actin filament organization; bicellular tight junction assembly; and epithelial cell morphogenesis. Predicted to be active in actin filament; adherens junction; and bicellular tight junction. Human ortholog(s) of this gene implicated in primary ovarian insufficiency 2B. Orthologous to human POF1B (POF1B actin binding protein). [provided by Alliance of Genome Resources, Nov 2024]
    Orthologs
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    Genomic context

    See pof1b in Genome Data Viewer
    Location:
    chromosome: 21
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 21 NC_007132.7 (38513532..38581880, complement)
    105 previous assembly GRCz10 (GCF_000002035.5) 21 NC_007132.6 (38465551..38534322, complement)

    Chromosome 21 - NC_007132.7Genomic Context describing neighboring genes Neighboring gene POU class 4 homeobox 4 Neighboring gene protein sprouty homolog 2 Neighboring gene solute carrier family 25 member 14 Neighboring gene G protein-coupled receptor 119

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    General protein information

    Preferred Names
    protein POF1B
    Names
    premature ovarian failure, 1B

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007132.7 Reference GRCz11 Primary Assembly

      Range
      38513532..38581880 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_068216131.1XP_068072232.1  protein POF1B isoform X1

      Related
      ENSDARP00000124164.2, ENSDART00000148939.3

    Reference GRCz11 ALT_DRER_TU_1

    Genomic

    1. NW_018395097.1 Reference GRCz11 ALT_DRER_TU_1

      Range
      326154..389957 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_068218980.1XP_068075081.1  protein POF1B isoform X1

    2. XM_002666059.7XP_002666105.6  protein POF1B isoform X2

    3. XM_068218979.1XP_068075080.1  protein POF1B isoform X2

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