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    SULF2 sulfatase 2 [ Pteropus alecto (black flying fox) ]

    Gene ID: 102893113, updated on 30-Mar-2024

    Summary

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    Gene symbol
    SULF2
    Gene description
    sulfatase 2
    Locus tag
    PAL_GLEAN10024441
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Pteropus alecto
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Pteropodoidea; Pteropodidae; Pteropodinae; Pteropus
    Orthologs
    human mouse all
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    Genomic context

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    See SULF2 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    21
    Annotation release Status Assembly Chr Location
    102 current ASM32557v1 (GCF_000325575.1) Unplaced Scaffold NW_006442491.1 (30451014..30557904, complement)

    NW_006442491.1Genomic Context describing neighboring genes Neighboring gene 5S ribosomal RNA Neighboring gene 5S ribosomal RNA Neighboring gene nuclear receptor coactivator 3 Neighboring gene uncharacterized LOC107196402 Neighboring gene uncharacterized LOC112471028 Neighboring gene nucleolin-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_006442491 Unplaced Scaffold Reference ASM32557v1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables N-acetylglucosamine-6-sulfatase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables calcium ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables glycosaminoglycan binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in Golgi apparatus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in cell surface IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in endoplasmic reticulum IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    extracellular sulfatase Sulf-2
    Names
    Extracellular sulfatase Sulf-2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Pteropus alecto Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM32557v1 Primary Assembly

    Genomic

    1. NW_006442491.1 Reference ASM32557v1 Primary Assembly

      Range
      30451014..30557904 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006921896.3 → XP_006921958.1  extracellular sulfatase Sulf-2 isoform X1

      UniProtKB/TrEMBL
      L5K0J0
      Conserved Domains (4) summary
      COG3119
      Location:43 → 395
      AslA; Arylsulfatase A or related enzyme [Inorganic ion transport and metabolism]
      pfam12548
      Location:534 → 660
      DUF3740; Sulfatase protein
      cd16147
      Location:43 → 385
      G6S; glucosamine (N-acetyl)-6-sulfatase(G6S, GNS) AND sulfatase 1(SULF1)
      cl23718
      Location:748 → 797
      ALP_like; alkaline phosphatases and sulfatases

    2. XM_025040050.1 → XP_024895818.1  extracellular sulfatase Sulf-2 isoform X2

      UniProtKB/TrEMBL
      L5K0J0
      Conserved Domains (3) summary
      cd16147
      Location:43 → 385
      G6S; glucosamine (N-acetyl)-6-sulfatase(G6S, GNS) AND sulfatase 1(SULF1)
      pfam12548
      Location:530 → 661
      DUF3740; Sulfatase protein
      cl23718
      Location:728 → 777
      ALP_like; alkaline phosphatases and sulfatases
    Nucleotide Protein
    Heading Accession and Version

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