thoc1.L THO complex 1 protein L homeolog [Xenopus laevis (African clawed frog)] - Gene

Summary

Official Symbol: thoc1.L
Official Full Name: THO complex 1 protein L homeolog
Primary source: Xenbase:XB-GENE-951675
Locus tag: XELAEV_18031895mg
See related: EnsemblRapid:ENSXLAG00005034001
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Xenopus laevis
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as: thoc1
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Genomic context

Location:: chromosome: 6L

Exon count:: 21

Annotation release	Status	Assembly	Chr	Location
101	current	Xenopus_laevis_v10.1 (GCF_017654675.1)	6L	NC_054381.1 (115219608..115242069)
100	previous assembly	Xenopus_laevis_v2 (GCF_001663975.1)	6L	NC_030734.1 (108136577..108159170)

Chromosome 6L - NC_054381.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by Xenbase

Process	Evidence Code	Pubs
acts_upstream_of_or_within mRNA export from nucleus	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within regulation of DNA-templated transcription elongation	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within signal transduction	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
part_of THO complex part of transcription export complex	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: THO complex 1 protein L homeolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001089021.1 → NP_001082490.1 THO complex 1 protein L homeolog

See identical proteins and their annotated locations for NP_001082490.1

Status: PROVISIONAL

Source sequence(s)

BC100211

UniProtKB/TrEMBL

Q498H9, Q640G4

Related

ENSXLAP00005102188.1, ENSXLAT00005104181.1

Conserved Domains (2) summary

cd08318
Location:562 → 647

Death_NMPP84; Death domain of Nuclear Matrix Protein P84

pfam11957
Location:70 → 536

efThoc1; THO complex subunit 1 transcription elongation factor