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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001161535.1 → NP_001155007.1 immunoglobulin superfamily containing leucine-rich repeat protein 2 isoform a
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) encodes the longer isoform (a).
- Source sequence(s)
-
BC096531
- Consensus CDS
-
CCDS52812.1
- UniProtKB/TrEMBL
-
E9Q9N7
- Related
- ENSMUSP00000130879.2, ENSMUST00000163200.3
- Conserved Domains (5) summary
-
- smart00082
Location:225 → 273
- LRRCT; Leucine rich repeat C-terminal domain
- sd00033
Location:80 → 96
- LRR_RI; leucine-rich repeat [structural motif]
- pfam12799
Location:144 → 183
- LRR_4; Leucine Rich repeats (2 copies)
- pfam13855
Location:164 → 227
- LRR_8; Leucine rich repeat
- pfam13895
Location:288 → 417
- Ig_2; Immunoglobulin domain
-
NM_001161536.1 → NP_001155008.1 immunoglobulin superfamily containing leucine-rich repeat protein 2 isoform b precursor
See identical proteins and their annotated locations for NP_001155008.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) differs in the 5' UTR, lacks a portion of the 5' coding region, and uses a downstream translational start codon, compared to variant 1. The encoded isoform (b) is shorter than isoform a. Variants 2-8 encode the same isoform.
- Source sequence(s)
-
BC096531, CA325040, CA328406
- Consensus CDS
-
CCDS23238.1
- UniProtKB/Swiss-Prot
- C8XPY9, Q5RKR3, Q6ZPQ3
- Related
- ENSMUSP00000130322.2, ENSMUST00000163897.8
- Conserved Domains (6) summary
-
- TIGR00864
Location:154 → 228
- PCC; polycystin cation channel protein
- sd00033
Location:36 → 52
- LRR_RI; leucine-rich repeat [structural motif]
- pfam13855
Location:99 → 159
- LRR_8; Leucine rich repeat
- pfam13927
Location:232 → 360
- Ig_3; Immunoglobulin domain
- cd00096
Location:256 → 263
- Ig; Ig strand B [structural motif]
- cl11960
Location:351 → 373
- Ig; Immunoglobulin domain
-
NM_001161537.1 → NP_001155009.1 immunoglobulin superfamily containing leucine-rich repeat protein 2 isoform b precursor
See identical proteins and their annotated locations for NP_001155009.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (3) differs in the 5' UTR, lacks a portion of the 5' coding region, and uses a downstream translational start codon, compared to variant 1. The encoded isoform (b) is shorter than isoform a. Variants 2-8 encode the same isoform.
- Source sequence(s)
-
BC096531, CB526596
- Consensus CDS
-
CCDS23238.1
- UniProtKB/Swiss-Prot
- C8XPY9, Q5RKR3, Q6ZPQ3
- Conserved Domains (6) summary
-
- TIGR00864
Location:154 → 228
- PCC; polycystin cation channel protein
- sd00033
Location:36 → 52
- LRR_RI; leucine-rich repeat [structural motif]
- pfam13855
Location:99 → 159
- LRR_8; Leucine rich repeat
- pfam13927
Location:232 → 360
- Ig_3; Immunoglobulin domain
- cd00096
Location:256 → 263
- Ig; Ig strand B [structural motif]
- cl11960
Location:351 → 373
- Ig; Immunoglobulin domain
-
NM_001161538.1 → NP_001155010.1 immunoglobulin superfamily containing leucine-rich repeat protein 2 isoform b precursor
See identical proteins and their annotated locations for NP_001155010.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (5) differs in the 5' UTR, lacks a portion of the 5' coding region, and uses a downstream translational start codon, compared to variant 1. The encoded isoform (b) is shorter than isoform a. Variants 2-8 encode the same isoform.
- Source sequence(s)
-
BC096531, CA750352
- Consensus CDS
-
CCDS23238.1
- UniProtKB/Swiss-Prot
- C8XPY9, Q5RKR3, Q6ZPQ3
- Related
- ENSMUSP00000127228.2, ENSMUST00000170421.8
- Conserved Domains (6) summary
-
- TIGR00864
Location:154 → 228
- PCC; polycystin cation channel protein
- sd00033
Location:36 → 52
- LRR_RI; leucine-rich repeat [structural motif]
- pfam13855
Location:99 → 159
- LRR_8; Leucine rich repeat
- pfam13927
Location:232 → 360
- Ig_3; Immunoglobulin domain
- cd00096
Location:256 → 263
- Ig; Ig strand B [structural motif]
- cl11960
Location:351 → 373
- Ig; Immunoglobulin domain
-
NM_001161539.1 → NP_001155011.1 immunoglobulin superfamily containing leucine-rich repeat protein 2 isoform b precursor
See identical proteins and their annotated locations for NP_001155011.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (6) differs in the 5' UTR, lacks a portion of the 5' coding region, and uses a downstream translational start codon, compared to variant 1. The encoded isoform (b) is shorter than isoform a. Variants 2-8 encode the same isoform.
- Source sequence(s)
-
BC096531, CD350184
- Consensus CDS
-
CCDS23238.1
- UniProtKB/Swiss-Prot
- C8XPY9, Q5RKR3, Q6ZPQ3
- Conserved Domains (6) summary
-
- TIGR00864
Location:154 → 228
- PCC; polycystin cation channel protein
- sd00033
Location:36 → 52
- LRR_RI; leucine-rich repeat [structural motif]
- pfam13855
Location:99 → 159
- LRR_8; Leucine rich repeat
- pfam13927
Location:232 → 360
- Ig_3; Immunoglobulin domain
- cd00096
Location:256 → 263
- Ig; Ig strand B [structural motif]
- cl11960
Location:351 → 373
- Ig; Immunoglobulin domain
-
NM_001161540.1 → NP_001155012.1 immunoglobulin superfamily containing leucine-rich repeat protein 2 isoform b precursor
See identical proteins and their annotated locations for NP_001155012.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (7) differs in the 5' UTR, lacks a portion of the 5' coding region, and uses a downstream translational start codon, compared to variant 1. The encoded isoform (b) is shorter than isoform a. Variants 2-8 encode the same isoform.
- Source sequence(s)
-
BC096531, BQ443868, BY111208
- Consensus CDS
-
CCDS23238.1
- UniProtKB/Swiss-Prot
- C8XPY9, Q5RKR3, Q6ZPQ3
- Related
- ENSMUSP00000129328.2, ENSMUST00000165276.2
- Conserved Domains (6) summary
-
- TIGR00864
Location:154 → 228
- PCC; polycystin cation channel protein
- sd00033
Location:36 → 52
- LRR_RI; leucine-rich repeat [structural motif]
- pfam13855
Location:99 → 159
- LRR_8; Leucine rich repeat
- pfam13927
Location:232 → 360
- Ig_3; Immunoglobulin domain
- cd00096
Location:256 → 263
- Ig; Ig strand B [structural motif]
- cl11960
Location:351 → 373
- Ig; Immunoglobulin domain
-
NM_001161541.1 → NP_001155013.1 immunoglobulin superfamily containing leucine-rich repeat protein 2 isoform b precursor
See identical proteins and their annotated locations for NP_001155013.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (8) differs in the 5' UTR, lacks a portion of the 5' coding region, and uses a downstream translational start codon, compared to variant 1. The encoded isoform (b) is shorter than isoform a. Variants 2-8 encode the same isoform.
- Source sequence(s)
-
BB611833, BC096531
- Consensus CDS
-
CCDS23238.1
- UniProtKB/Swiss-Prot
- C8XPY9, Q5RKR3, Q6ZPQ3
- Related
- ENSMUSP00000109781.3, ENSMUST00000114144.9
- Conserved Domains (6) summary
-
- TIGR00864
Location:154 → 228
- PCC; polycystin cation channel protein
- sd00033
Location:36 → 52
- LRR_RI; leucine-rich repeat [structural motif]
- pfam13855
Location:99 → 159
- LRR_8; Leucine rich repeat
- pfam13927
Location:232 → 360
- Ig_3; Immunoglobulin domain
- cd00096
Location:256 → 263
- Ig; Ig strand B [structural motif]
- cl11960
Location:351 → 373
- Ig; Immunoglobulin domain
-
NM_177193.5 → NP_796167.2 immunoglobulin superfamily containing leucine-rich repeat protein 2 isoform b precursor
See identical proteins and their annotated locations for NP_796167.2
Status: VALIDATED
- Description
- Transcript Variant: This variant (4) differs in the 5' UTR, lacks a portion of the 5' coding region, and uses a downstream translational start codon, compared to variant 1. The encoded isoform (b) is shorter than isoform a. Variants 2-8 encode the same isoform.
- Source sequence(s)
-
BC059068, BY079125, CA328406
- Consensus CDS
-
CCDS23238.1
- UniProtKB/Swiss-Prot
- C8XPY9, Q5RKR3, Q6ZPQ3
- Related
- ENSMUSP00000149095.2, ENSMUST00000215950.2
- Conserved Domains (6) summary
-
- TIGR00864
Location:154 → 228
- PCC; polycystin cation channel protein
- sd00033
Location:36 → 52
- LRR_RI; leucine-rich repeat [structural motif]
- pfam13855
Location:99 → 159
- LRR_8; Leucine rich repeat
- pfam13927
Location:232 → 360
- Ig_3; Immunoglobulin domain
- cd00096
Location:256 → 263
- Ig; Ig strand B [structural motif]
- cl11960
Location:351 → 373
- Ig; Immunoglobulin domain
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCm39 C57BL/6J
Genomic
-
NC_000075.7 Reference GRCm39 C57BL/6J
- Range
-
58103580..58113563 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_036155062.1 → XP_036010955.1 immunoglobulin superfamily containing leucine-rich repeat protein 2 isoform X1
- UniProtKB/Swiss-Prot
- C8XPY9, Q5RKR3, Q6ZPQ3
- Conserved Domains (6) summary
-
- TIGR00864
Location:154 → 228
- PCC; polycystin cation channel protein
- sd00033
Location:36 → 52
- LRR_RI; leucine-rich repeat [structural motif]
- pfam13855
Location:99 → 159
- LRR_8; Leucine rich repeat
- pfam13927
Location:232 → 360
- Ig_3; Immunoglobulin domain
- cd00096
Location:256 → 263
- Ig; Ig strand B [structural motif]
- cl11960
Location:351 → 373
- Ig; Immunoglobulin domain
-
XM_036155064.1 → XP_036010957.1 immunoglobulin superfamily containing leucine-rich repeat protein 2 isoform X1
- UniProtKB/Swiss-Prot
- C8XPY9, Q5RKR3, Q6ZPQ3
- Conserved Domains (6) summary
-
- TIGR00864
Location:154 → 228
- PCC; polycystin cation channel protein
- sd00033
Location:36 → 52
- LRR_RI; leucine-rich repeat [structural motif]
- pfam13855
Location:99 → 159
- LRR_8; Leucine rich repeat
- pfam13927
Location:232 → 360
- Ig_3; Immunoglobulin domain
- cd00096
Location:256 → 263
- Ig; Ig strand B [structural motif]
- cl11960
Location:351 → 373
- Ig; Immunoglobulin domain
-
XM_036155061.1 → XP_036010954.1 immunoglobulin superfamily containing leucine-rich repeat protein 2 isoform X1
- UniProtKB/Swiss-Prot
- C8XPY9, Q5RKR3, Q6ZPQ3
- Conserved Domains (6) summary
-
- TIGR00864
Location:154 → 228
- PCC; polycystin cation channel protein
- sd00033
Location:36 → 52
- LRR_RI; leucine-rich repeat [structural motif]
- pfam13855
Location:99 → 159
- LRR_8; Leucine rich repeat
- pfam13927
Location:232 → 360
- Ig_3; Immunoglobulin domain
- cd00096
Location:256 → 263
- Ig; Ig strand B [structural motif]
- cl11960
Location:351 → 373
- Ig; Immunoglobulin domain
-
XM_030244418.2 → XP_030100278.1 immunoglobulin superfamily containing leucine-rich repeat protein 2 isoform X1
- UniProtKB/Swiss-Prot
- C8XPY9, Q5RKR3, Q6ZPQ3
- Conserved Domains (6) summary
-
- TIGR00864
Location:154 → 228
- PCC; polycystin cation channel protein
- sd00033
Location:36 → 52
- LRR_RI; leucine-rich repeat [structural motif]
- pfam13855
Location:99 → 159
- LRR_8; Leucine rich repeat
- pfam13927
Location:232 → 360
- Ig_3; Immunoglobulin domain
- cd00096
Location:256 → 263
- Ig; Ig strand B [structural motif]
- cl11960
Location:351 → 373
- Ig; Immunoglobulin domain
-
XM_006511230.3 → XP_006511293.1 immunoglobulin superfamily containing leucine-rich repeat protein 2 isoform X1
See identical proteins and their annotated locations for XP_006511293.1
- UniProtKB/Swiss-Prot
- C8XPY9, Q5RKR3, Q6ZPQ3
- Conserved Domains (6) summary
-
- TIGR00864
Location:154 → 228
- PCC; polycystin cation channel protein
- sd00033
Location:36 → 52
- LRR_RI; leucine-rich repeat [structural motif]
- pfam13855
Location:99 → 159
- LRR_8; Leucine rich repeat
- pfam13927
Location:232 → 360
- Ig_3; Immunoglobulin domain
- cd00096
Location:256 → 263
- Ig; Ig strand B [structural motif]
- cl11960
Location:351 → 373
- Ig; Immunoglobulin domain
-
XM_036155065.1 → XP_036010958.1 immunoglobulin superfamily containing leucine-rich repeat protein 2 isoform X1
- UniProtKB/Swiss-Prot
- C8XPY9, Q5RKR3, Q6ZPQ3
- Conserved Domains (6) summary
-
- TIGR00864
Location:154 → 228
- PCC; polycystin cation channel protein
- sd00033
Location:36 → 52
- LRR_RI; leucine-rich repeat [structural motif]
- pfam13855
Location:99 → 159
- LRR_8; Leucine rich repeat
- pfam13927
Location:232 → 360
- Ig_3; Immunoglobulin domain
- cd00096
Location:256 → 263
- Ig; Ig strand B [structural motif]
- cl11960
Location:351 → 373
- Ig; Immunoglobulin domain
-
XM_006511229.4 → XP_006511292.1 immunoglobulin superfamily containing leucine-rich repeat protein 2 isoform X1
See identical proteins and their annotated locations for XP_006511292.1
- UniProtKB/Swiss-Prot
- C8XPY9, Q5RKR3, Q6ZPQ3
- Conserved Domains (6) summary
-
- TIGR00864
Location:154 → 228
- PCC; polycystin cation channel protein
- sd00033
Location:36 → 52
- LRR_RI; leucine-rich repeat [structural motif]
- pfam13855
Location:99 → 159
- LRR_8; Leucine rich repeat
- pfam13927
Location:232 → 360
- Ig_3; Immunoglobulin domain
- cd00096
Location:256 → 263
- Ig; Ig strand B [structural motif]
- cl11960
Location:351 → 373
- Ig; Immunoglobulin domain
-
XM_006511232.4 → XP_006511295.1 immunoglobulin superfamily containing leucine-rich repeat protein 2 isoform X1
See identical proteins and their annotated locations for XP_006511295.1
- UniProtKB/Swiss-Prot
- C8XPY9, Q5RKR3, Q6ZPQ3
- Conserved Domains (6) summary
-
- TIGR00864
Location:154 → 228
- PCC; polycystin cation channel protein
- sd00033
Location:36 → 52
- LRR_RI; leucine-rich repeat [structural motif]
- pfam13855
Location:99 → 159
- LRR_8; Leucine rich repeat
- pfam13927
Location:232 → 360
- Ig_3; Immunoglobulin domain
- cd00096
Location:256 → 263
- Ig; Ig strand B [structural motif]
- cl11960
Location:351 → 373
- Ig; Immunoglobulin domain
-
XM_030244417.1 → XP_030100277.1 immunoglobulin superfamily containing leucine-rich repeat protein 2 isoform X1
- UniProtKB/Swiss-Prot
- C8XPY9, Q5RKR3, Q6ZPQ3
- Conserved Domains (6) summary
-
- TIGR00864
Location:154 → 228
- PCC; polycystin cation channel protein
- sd00033
Location:36 → 52
- LRR_RI; leucine-rich repeat [structural motif]
- pfam13855
Location:99 → 159
- LRR_8; Leucine rich repeat
- pfam13927
Location:232 → 360
- Ig_3; Immunoglobulin domain
- cd00096
Location:256 → 263
- Ig; Ig strand B [structural motif]
- cl11960
Location:351 → 373
- Ig; Immunoglobulin domain
-
XM_006511231.5 → XP_006511294.1 immunoglobulin superfamily containing leucine-rich repeat protein 2 isoform X1
See identical proteins and their annotated locations for XP_006511294.1
- UniProtKB/Swiss-Prot
- C8XPY9, Q5RKR3, Q6ZPQ3
- Conserved Domains (6) summary
-
- TIGR00864
Location:154 → 228
- PCC; polycystin cation channel protein
- sd00033
Location:36 → 52
- LRR_RI; leucine-rich repeat [structural motif]
- pfam13855
Location:99 → 159
- LRR_8; Leucine rich repeat
- pfam13927
Location:232 → 360
- Ig_3; Immunoglobulin domain
- cd00096
Location:256 → 263
- Ig; Ig strand B [structural motif]
- cl11960
Location:351 → 373
- Ig; Immunoglobulin domain
-
XM_006511234.5 → XP_006511297.1 immunoglobulin superfamily containing leucine-rich repeat protein 2 isoform X1
See identical proteins and their annotated locations for XP_006511297.1
- UniProtKB/Swiss-Prot
- C8XPY9, Q5RKR3, Q6ZPQ3
- Conserved Domains (6) summary
-
- TIGR00864
Location:154 → 228
- PCC; polycystin cation channel protein
- sd00033
Location:36 → 52
- LRR_RI; leucine-rich repeat [structural motif]
- pfam13855
Location:99 → 159
- LRR_8; Leucine rich repeat
- pfam13927
Location:232 → 360
- Ig_3; Immunoglobulin domain
- cd00096
Location:256 → 263
- Ig; Ig strand B [structural motif]
- cl11960
Location:351 → 373
- Ig; Immunoglobulin domain
-
XM_030244419.2 → XP_030100279.1 immunoglobulin superfamily containing leucine-rich repeat protein 2 isoform X1
- UniProtKB/Swiss-Prot
- C8XPY9, Q5RKR3, Q6ZPQ3
- Conserved Domains (6) summary
-
- TIGR00864
Location:154 → 228
- PCC; polycystin cation channel protein
- sd00033
Location:36 → 52
- LRR_RI; leucine-rich repeat [structural motif]
- pfam13855
Location:99 → 159
- LRR_8; Leucine rich repeat
- pfam13927
Location:232 → 360
- Ig_3; Immunoglobulin domain
- cd00096
Location:256 → 263
- Ig; Ig strand B [structural motif]
- cl11960
Location:351 → 373
- Ig; Immunoglobulin domain
-
XM_036155063.1 → XP_036010956.1 immunoglobulin superfamily containing leucine-rich repeat protein 2 isoform X1
- UniProtKB/Swiss-Prot
- C8XPY9, Q5RKR3, Q6ZPQ3
- Conserved Domains (6) summary
-
- TIGR00864
Location:154 → 228
- PCC; polycystin cation channel protein
- sd00033
Location:36 → 52
- LRR_RI; leucine-rich repeat [structural motif]
- pfam13855
Location:99 → 159
- LRR_8; Leucine rich repeat
- pfam13927
Location:232 → 360
- Ig_3; Immunoglobulin domain
- cd00096
Location:256 → 263
- Ig; Ig strand B [structural motif]
- cl11960
Location:351 → 373
- Ig; Immunoglobulin domain