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    CDC42BPB CDC42 binding protein kinase beta [ Chaetura pelagica (chimney swift) ]

    Gene ID: 104390631, updated on 3-Aug-2024

    Summary

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    Gene symbol
    CDC42BPB
    Gene description
    CDC42 binding protein kinase beta
    Locus tag
    M959_14167
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Chaetura pelagica
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Strisores; Apodiformes; Apodidae; Apodinae; Chaetura
    Orthologs
    human mouse all
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    Genomic context

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    See CDC42BPB in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    38
    Annotation release Status Assembly Chr Location
    100 current ChaPel_1.0 (GCF_000747805.1) Unplaced Scaffold NW_009953598.1 (148892..267998)

    NW_009953598.1Genomic Context describing neighboring genes Neighboring gene exocyst complex component 3 like 4 Neighboring gene protein LBH-like Neighboring gene amnion associated transmembrane protein Neighboring gene TNF receptor associated factor 3

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_009953598.1 Unplaced Scaffold Reference ChaPel_1.0

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein serine/threonine kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in actomyosin structure organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in peptidyl-threonine phosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in cytoskeleton IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    serine/threonine-protein kinase MRCK beta
    Names
    Serine/threonine-protein kinase MRCK beta

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Chaetura pelagica Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ChaPel_1.0

    Genomic

    1. NW_009953598.1 Reference ChaPel_1.0

      Range
      148892..267998
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_009999807.1 → XP_009998109.1  serine/threonine-protein kinase MRCK beta

      UniProtKB/TrEMBL
      A0A093BJB4
      Conserved Domains (8) summary
      pfam08826
      Location:911 → 967
      DMPK_coil; DMPK coiled coil domain like
      smart00220
      Location:109 → 375
      S_TKc; Serine/Threonine protein kinases, catalytic domain
      COG1340
      Location:515 → 812
      COG1340; Uncharacterized coiled-coil protein, contains DUF342 domain [Function unknown]
      cd00029
      Location:1059 → 1108
      C1; Protein kinase C conserved region 1 (C1) . Cysteine-rich zinc binding domain. Some members of this domain family bind phorbol esters and diacylglycerol, some are reported to bind RasGTP. May occur in tandem arrangement. Diacylglycerol (DAG) is a second ...
      cd01243
      Location:1118 → 1252
      PH_MRCK; MRCK (myotonic dystrophy-related Cdc42-binding kinase) pleckstrin homology (PH) domain
      pfam00780
      Location:1278 → 1543
      CNH; CNH domain
      pfam15796
      Location:561 → 639
      KELK; KELK-motif containing domain of MRCK Ser/Thr protein kinase
      cl21453
      Location:93 → 444
      PKc_like; Protein Kinases, catalytic domain
    Nucleotide Protein
    Heading Accession and Version

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