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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Methylation profiling by high throughput sequencing
GSE19786	Neuronal MeCP2 is expressed at near histone-octamer levels and globally alters the chromatin state	Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	2	BEDGRAPH SRA Run Selector	Adrian P Bird	Mar 04, 2010
GSE19824	Genome-wide evolutionary analysis of eukaryotic DNA methylation	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Apis mellifera Bombyx mori Chlorella variabilis Ciona intestinalis Coprinopsis cinerea Drosophila melanogaster Laccaria bicolor Nematostella vectensis Oryza sativa Phycomyces blakesleeanus Physcomitrium patens Postia placenta Selaginella moellendorffii Tetraodon nigroviridis Tribolium castaneum Uncinocarpus reesii Volvox carteri	33	GFF TXT SRA Run Selector	Toshiro Nishimura	Apr 15, 2010
GSE19889	Repressive and active histone methylation mark distinct promoters in human and mouse spermatozoa (Illumina)	Methylation profiling by high throughput sequencing	Homo sapiens	7	WIG SRA Run Selector	Antoine Peters	May 16, 2010
GSE19892	Repressive and active histone methylation mark distinct promoters in human and mouse spermatozoa	Methylation profiling by high throughput sequencing Genome binding/occupancy profiling by genome tiling array	Homo sapiens	13	PAIR WIG	Antoine Peters	May 16, 2010
GSE19937	Human embryonic stem cells HELP-tagging cytosine methylation data (Albert Einstein College of Medicine)	Methylation profiling by high throughput sequencing	Homo sapiens	4	BED SRA Run Selector	John Greally	Apr 12, 2010
GSE19960	Genome-wide erasure of DNA methylation in mouse primordial germ cells is affected by Aid deficiency	Methylation profiling by high throughput sequencing	Mus musculus	12	TXT SRA Run Selector	matteo Pellegrini	Jan 26, 2010
GSE20898	Genome-wide Analyses of Transcription Factor GATA3-Mediated Gene Regulation in Distinct T Cell Types	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	53	BED BEDGRAPH RPKM SRA Run Selector	Brian J Abraham	Aug 26, 2011
GSE21152	Conservation and divergence of methylation patterning in plants and animals	Methylation profiling by high throughput sequencing	Apis mellifera Arabidopsis thaliana Chlamydomonas reinhardtii Ciona intestinalis Danio rerio Mus musculus Oryza sativa Populus trichocarpa	14	TXT SRA Run Selector	matteo Pellegrini	Apr 09, 2010
GSE21167	Examination of whole genome DNA methylation status of two chicken breeds	Methylation profiling by high throughput sequencing	Gallus gallus	4	TXT SRA Run Selector	qinghe li	Apr 02, 2010
GSE21170	Genome-wide Differential DNA Methylation in the Wild and Domestic Chicken	Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing	Gallus gallus	8	TXT	qinghe li	Apr 02, 2010
GSE21242	Chromatin and Sequence Features that Define the Fine and Gross Structure of Genomics Methylation Patterns	Methylation profiling by high throughput sequencing	Homo sapiens Mus musculus	8	BED TXT SRA Run Selector	John R. Edwards	Apr 16, 2010
GSE21414	Genome-wide mapping of cytosine methylation revealed dynamic DNA methylation patterns associated with rice centromeres	Methylation profiling by high throughput sequencing	Oryza sativa	1	TXT SRA Run Selector	Yufeng Wu	Apr 22, 2010
GSE21442	Comprehensive analysis of orphan CpG islands identifes novel promoters with conserved DNA methylation dynamics	Methylation profiling by high throughput sequencing	Homo sapiens Mus musculus	32	BEDGRAPH SRA Run Selector	Adrian P Bird	Oct 05, 2010
GSE21673	Relationship between nucleosome positioning and DNA methylation	Methylation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Genome binding/occupancy profiling by genome tiling array	Arabidopsis thaliana Homo sapiens	6	CEL TXT	matteo Pellegrini	May 29, 2010
GSE21714	Comparative methylome analysis of benign and malignant peripheral nerve sheath tumors	Methylation profiling by high throughput sequencing	Homo sapiens	3	BAM GFF SRA Run Selector	Gareth Wilson	Jan 01, 2011
GSE21821	Relationship between nucleosome positioning and DNA methylation: Bisulfite-Seq, ChIP-Seq, and Mnase-Seq	Methylation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Arabidopsis thaliana Homo sapiens	4	TXT SRA Run Selector	matteo Pellegrini	May 29, 2010
GSE22376	Phyloepigenetic comparison of apes	Methylation profiling by high throughput sequencing	Homo sapiens Pan troglodytes Pongo pygmaeus	11	TXT WIG SRA Run Selector	Dario Boffelli	Sep 09, 2011
GSE22591	Local DNA hypomethylation activates genes in rice endosperm	Methylation profiling by high throughput sequencing	Oryza sativa	4	GFF TXT SRA Run Selector	Toshiro Nishimura	Nov 01, 2010
GSE23379	Small RNA profiling of strains and lifecycle of Chlamydomonas reinhardtii	Non-coding RNA profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Chlamydomonas reinhardtii	14	TXT SRA Run Selector	Krys Kelly	Aug 02, 2012
GSE23913	Temporal uncoupling of the DNA methylome and transcriptional repression during embryogenesis	Methylation profiling by high throughput sequencing	Xenopus tropicalis	4	BED SRA Run Selector	Ozren Bogdanovic	Jun 23, 2011