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18 series

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Accession	Title	Series type(s)	Organism(s)	Samples	GDS	Supplementary	Contact	Release date
Filter		Expression profiling by high throughput sequencing	Rattus norvegicus			BIGWIG
GSE216263	Transcriptome changes in cardiomyocytes isolated from a rat model of progressive heart failure	Expression profiling by high throughput sequencing	Rattus norvegicus	82		BIGWIG CSV XLSX SRA Run Selector	Axel Weber	Apr 15, 2024
GSE241561	SRF transcriptionally regulates the oligodendrocyte cytoskeleton during CNS myelination	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus Rattus norvegicus	33		BIGWIG MTX NARROWPEAK RESULTS TSV	Fabian Michael Kern	Feb 23, 2024
GSE197926	TAD Evolutionary and functional characterization reveals diversity in mammalian TAD boundary properties and function	Other Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Hylobates moloch Macaca mulatta Mus caroli Mus musculus Mus pahari Nomascus leucogenys Rattus norvegicus	85		BED BEDGRAPH BIGWIG BW COOL XLSX	Mariam Okhovat	Oct 20, 2023
GSE205838	Disrupted propionate metabolism evokes transcriptional changes in the heart by increasing histone acetylation and propionylation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus Rattus norvegicus	41		BIGWIG	Pawel Swietach	Sep 28, 2023
GSE141278	Transcription regulation of SNCA by dystonia type 6 gene product THAP1	Genome binding/occupancy profiling by high throughput sequencing Other Expression profiling by high throughput sequencing	Homo sapiens Rattus norvegicus	37		BED BEDGRAPH BIGWIG TSV	Fubo Cheng	Sep 28, 2022
GSE184961	THAP1 is cell type dependent regulator of SP1 family crucial for dystonic syndromes in human and rat	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Rattus norvegicus	30		BIGWIG TAB TXT	Fubo Cheng	Sep 28, 2022
GSE179220	H3K4 di-methylation controls smooth muscle cell lineage identity and vascular homeostasis	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens Rattus norvegicus	33		BIGWIG	Delphine Gomez	Oct 15, 2021
GSE163564	Genome wide chromatin accessibility analysis reveals a role for CREB in retinal ganglion cells axon growth decline in development and regeneration after optic nerve injury	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Rattus norvegicus	12		BED BIGWIG TXT	Guoyan Zhao	Jul 28, 2021
GSE161241	MiR-124 synergism with ELAVL3 enhances target gene expression to promote neuronal maturity	Other Expression profiling by high throughput sequencing	Homo sapiens Rattus norvegicus	18		BIGWIG BW	Ya-Lin Lu	May 25, 2021
GSE163302	Conserved Spermatogonial Gene Networks Couple to Glutathione and Pentose Phosphate Metabolism but not Cysteine Biosynthesis	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Rattus norvegicus	8		BIGWIG TXT SRA Run Selector	F. Kent Hamra	Dec 17, 2020
GSE134800	PRO-seq assay in adult ventricular cardiomyocytes	Expression profiling by high throughput sequencing Other	Rattus norvegicus	10		BIGWIG SRA Run Selector	Yuliang Tan	Dec 09, 2020
GSE134801	Adult ventricular cardiomyocytes	Expression profiling by high throughput sequencing Other Genome binding/occupancy profiling by high throughput sequencing	Rattus norvegicus	70		BIGWIG	Yuliang Tan	Dec 09, 2020
GSE144147	A Balance Between Intermediate Filaments and Microtubules Maintains Nuclear Architecture in the Cardiomyocyte	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Rattus norvegicus	28		BED BIGWIG XLS SRA Run Selector	Julie Heffler	Jan 24, 2020
GSE133917	The NMDA receptor subunit GluN3A regulates a program of synaptic activity-induced and MEF2C-dependent transcription	Expression profiling by high throughput sequencing	Rattus norvegicus	12		BIGWIG XLSX SRA Run Selector	Anne West	Jul 08, 2019
GSE99278	Integrative epigenomic analyses of early-life hypothalamic response to augmented maternal care [RNA-seq]	Expression profiling by high throughput sequencing	Rattus norvegicus	6		BIGWIG SRA Run Selector	Keith Dunaway	Apr 21, 2019
GSE99282	Integrative epigenomic analyses of early-life hypothalamic response to augmented maternal care	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing Non-coding RNA profiling by array	Rattus norvegicus	24		BED BIGWIG RCC	Keith Dunaway	Apr 21, 2019
GSE129924	Free circular introns with an unusual branchpoint in neuronal projections	Expression profiling by high throughput sequencing Other	Rattus norvegicus	22		BIGWIG BW SRA Run Selector	Harleen Saini	Apr 18, 2019
GSE81811	Temporal Transcriptomic and Proteomic Landscapes of Deteriorating Pancreatic Islets in Type 2 Diabetic Rats	Expression profiling by high throughput sequencing	Rattus norvegicus	34		BIGWIG BW SRA Run Selector	Wen Zhong	Dec 22, 2017