GEO Browser - GEO

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86 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter			Rattus norvegicus		BW
GSE255335	Epigenetic imprinting of H3K4me3 in adipose-derived stem cells by HFS diet consumption leads to a disturbed transcriptomic profile in adipocytes [ChIP-seq]	Genome binding/occupancy profiling by high throughput sequencing	Rattus norvegicus	7	BW	Armando Roberto Tovar Palacio	Jun 06, 2024
GSE232953	Small-molecule-induced epigenetic rejuvenation overcomes myelinogenic barriers and stimulates myelin repair [Cut&Run]	Genome binding/occupancy profiling by high throughput sequencing	Rattus norvegicus	8	BW WIG	XUEZHAO LIU	May 24, 2024
GSE232956	Small-molecule-induced epigenetic rejuvenation overcomes myelinogenic barriers and stimulates myelin repair	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus Rattus norvegicus	21	BW TXT WIG	XUEZHAO LIU	May 24, 2024
GSE188559	Shared patterns of glial transcriptional dysregulation link Huntington's disease and schizophrenia	Genome binding/occupancy profiling by high throughput sequencing Third-party reanalysis	Homo sapiens Rattus norvegicus	2	BW NARROWPEAK TXT SRA Run Selector	Steven Goldman	May 08, 2024
GSE226498	Epigenetic evolution of the Ly49 gene family [ATAC-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus Rattus norvegicus	27	BW	Changxu Fan	Apr 20, 2024
GSE226502	Epigenetic evolution of the Ly49 gene family	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Mus musculus Rattus norvegicus	65	BEDGRAPH BW CSV FA HIC TXT	Changxu Fan	Apr 20, 2024
GSE216264	Transcriptome changes in a rat model of progressive heart failure	Expression profiling by high throughput sequencing	Rattus norvegicus	99	BW CSV XLSX SRA Run Selector	Axel Weber	Apr 15, 2024
GSE225371	Further inhibition of Histone H2A ubiquitination protects myocardium against ischemia/reperfusion injury through enhancing glycolysis and improving mitochondrial function via promoting Hsp27 expression	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Rattus norvegicus	14	BW NARROWPEAK	Long Pi Shi	Dec 27, 2023
GSE225538	Further inhibition of Histone H2A ubiquitination protects myocardium against ischemia/reperfusion injury through enhancing glycolysis and improving mitochondrial function via promoting Hsp27 expression [III]	Genome binding/occupancy profiling by high throughput sequencing	Rattus norvegicus	2	BW NARROWPEAK	Long Pi Shi	Dec 27, 2023
GSE245740	Genome-wide map of FOXO1-bound chromatin in pituitary somatotropes	Genome binding/occupancy profiling by high throughput sequencing	Rattus norvegicus	2	BW	Buffy Sue Ellsworth	Dec 14, 2023
GSE197926	TAD Evolutionary and functional characterization reveals diversity in mammalian TAD boundary properties and function	Other Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Hylobates moloch Macaca mulatta Mus caroli Mus musculus Mus pahari Nomascus leucogenys Rattus norvegicus	85	BED BEDGRAPH BIGWIG BW COOL XLSX	Mariam Okhovat	Oct 20, 2023
GSE232960	Transcription factor NFYa controls cardiomyocyte metabolism and proliferation during fetal heart development [ChIP-seq]	Genome binding/occupancy profiling by high throughput sequencing	Rattus norvegicus	6	BW	Miao Cui	Oct 13, 2023
GSE232963	Transcription factor NFYa controls cardiomyocyte metabolism and proliferation during fetal heart development	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus Rattus norvegicus	12	BW H5 PNG	Miao Cui	Oct 13, 2023
GSE245064	STAT1 deficiency underlies a proinflammatory imprint of naive CD4+ T cells in spondyloarthritis [ChIP-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Rattus norvegicus	18	BW NARROWPEAK	Frédéric Crémazy	Oct 11, 2023
GSE245067	STAT1 deficiency underlies a proinflammatory imprint of naive CD4+ T cells in spondyloarthritis	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Rattus norvegicus	44	BW NARROWPEAK	Frédéric Crémazy	Oct 11, 2023
GSE158760	ChIP-seq data from pika Epas1 knock in MAF and RNA-seq data from mouse, rat, rabbit and Tibetan pika fibroblasts	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus Ochotona curzoniae Oryctolagus cuniculus Rattus norvegicus	18	BW TXT SRA Run Selector	wang jiawen	Sep 29, 2023
GSE154063	Transcriptome profile of ENDOC-BH1 cells and isolated murine islets modulating TFEB expression	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus Rattus norvegicus	74	BW TXT	Rossella De Cegli	Jul 31, 2023
GSE202240	H3K27me3 ChIP-sequencing of control and α-KG treated neonatal primary cardiomyocytes	Genome binding/occupancy profiling by high throughput sequencing	Rattus norvegicus	6	BW TXT	Yu Shi	Jul 02, 2023
GSE151615	Axon-enriched lincRNA ALAE is required for axon elongation via regulating local mRNA translation	Non-coding RNA profiling by high throughput sequencing	Rattus norvegicus	3	BW SRA Run Selector	Bin Wang	Jun 02, 2023
GSE211403	Nono deficiency impedes the proliferation and adhesion of H9c2 cardiomyocytes through Pi3k/Akt signaling pathway [ATAC-seq]	Genome binding/occupancy profiling by high throughput sequencing	Rattus norvegicus	4	BW	Xinrui Wang	May 01, 2023