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595 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Genome binding/occupancy profiling by high throughput sequencing			CEL
GSE11658	The association between gene expression and whole genome histone H3K4 mono-, di, and trimethylation	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by array	Arabidopsis thaliana	12	CEL TAR XLS	Jean-Jack M. Riethoven	Dec 07, 2010
GSE11673	Identification of candidate p73 target genes	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	5	CEL	Jennifer Pietenpol	Aug 06, 2008
GSE12646	Chromatin Signatures in Multipotent Human HSCs Indicate the Fate of Bivalent Genes during Differentiation	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by array	Homo sapiens	24	BED CEL CHP TXT SRA Run Selector	Chongzhi Zang	Jan 09, 2009
GSE12889	CTCF demarcates chromatin domains	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	7	BED CEL TXT SRA Run Selector	Raja Jothi	Oct 20, 2008
GSE14009	Nutritional control of gene expression during C. elegans L1 arrest and recovery	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing	Caenorhabditis elegans	32	CEL CHP EXP	L. Ryan Baugh	Feb 27, 2009
GSE14344	esBAF is an essential component of the core pluripotency transcriptional network	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	8	BED CEL TXT SRA Run Selector	Raja Jothi	Jan 20, 2009
GSE14636	Target genes of the MADS transcription factor SEPALLATA3	Genome binding/occupancy profiling by array Genome binding/occupancy profiling by high throughput sequencing	Arabidopsis thaliana	9	BAR CEL TXT	Gerco Angenent	Apr 21, 2009
GSE15519	Expression and ChIP-seq analyses of embryonic stem cells, extraembryonic endoderm stem cells, and trophoblast stem cells	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	16	CEL CHP WIG SRA Run Selector	Brian Joseph Cox	May 17, 2010
GSE15735	Genome-wide mapping of HATs and HDACs in human CD4+ T cells	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by array	Homo sapiens	41	BED CEL CHP TXT XLS ZIP SRA Run Selector	Chongzhi Zang	Aug 20, 2009
GSE15909	Gene expression and UH2A ChIP-Seq binding analysis in Bmi1 knock-out and wild type MEFs	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	4	BED CEL CHP TXT	Raja Jothi	May 20, 2009
GSE17067	A quantitative model of transcription regulation reveals the role of non-conserved enhancers	Expression profiling by array Genome binding/occupancy profiling by genome tiling array Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	28	BED CEL GPR TXT SRA Run Selector	Kenzie MacIsaac	May 13, 2010
GSE17312	BI Human Reference Epigenome Mapping Project	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by array	Homo sapiens	633	BAM BED CEL WIG SRA Run Selector	BROAD INSTITUTE	Aug 05, 2009
GSE17697	Complex patterns of accessibility discriminate sites of PcG repression, H4K16 acetylation and replication initiation	Methylation profiling by genome tiling array Genome binding/occupancy profiling by genome tiling array Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster	11	CEL TXT SRA Run Selector	Michaela Schwaiger	Mar 16, 2010
GSE18017	Stat6 mediated regulation of transcription to initiate Th2 program in human T cells	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	116	CEL TXT	Henna Kallionpää	Jun 25, 2010
GSE18125	Epigenetic regulation of Bmp2 and Smad6 in Ras-induced senescence	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by array	Mus musculus	10	BED CEL SRA Run Selector	Atsushi Kaneda	Dec 22, 2011
GSE18927	University of Washington Human Reference Epigenome Mapping Project	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by array Expression profiling by high throughput sequencing	Homo sapiens	758	BAM BED CEL TXT WIG SRA Run Selector	Northwest REMC	Jan 06, 2010
GSE18990	Proteomic analysis of native hepatocyte nuclear factor-4{alpha} (HNF4{alpha}) isoforms, phosphorylation status, and interactive cofactors.	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	12	CEL TXT	Kenji Daigo	Dec 22, 2010
GSE19198	Analysis of interleukin-21-induced Prdm1 gene regulation reveals functional cooperation of STAT3 and IRF4 TFs	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	56	CEL SRA Run Selector	Warren J Leonard	Jan 08, 2010
GSE19899	Dissecting the unique role of the retinoblastoma tumor suppressor during cellular senescence	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	50	BED CEL	Agustin Chicas	Jan 15, 2010
GSE20472	Pausing of RNA polymerase II disrupts DNA-specified nucleosome organization to enable precise gene regulation	Genome binding/occupancy profiling by genome tiling array Genome binding/occupancy profiling by high throughput sequencing Expression profiling by array	Drosophila melanogaster	30	CEL CHP PAIR	Karen Adelman	Oct 18, 2010