GEO Browser - GEO - NCBI

NCBI » GEO » Repository browser » SeriesLogin

Series

Samples

Platforms

DataSets

Summary | Advanced search

14 series

Export

Accession	Title	Series type(s)	Organism(s)	Samples	GDS	Supplementary	Contact	Release date
Filter		Genome binding/occupancy profiling by high throughput sequencing	Mus musculus			CLOUPE
GSE247130	CEBPA restricts alveolar type 2 cell plasticity during development and injury-repair [1]	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	12		BROADPEAK CLOUPE H5 RDS TBI TSV	Dalia Hassan	Apr 18, 2024
GSE234167	MERTK inhibition for the treatment of tissue fibrosis [scMultiome]	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	4		BED BIGWIG CLOUPE CSV H5 TBI TSV	Ziyan Pan	Mar 05, 2024
GSE235624	MERTK inhibition for the treatment of tissue fibrosis	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	154		BED BEDGRAPH BIGWIG BW CLOUPE CSV H5 TAB TBI TSV	Ziyan Pan	Mar 05, 2024
GSE158730	NFI transcription factors regulate zonal olfactory receptor expression	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	237		BIGWIG BW CIF CLOUPE COOL CSV H5 JSON PNG TIFF TXT SRA Run Selector	Elizaveta Bashkirova	Jun 14, 2023
GSE233470	EZH2 inhibtion and IFNy treatment of patient derived organoids	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	54		CLOUPE	Jinpeng Liu	May 31, 2023
GSE213744	Lung lymphatic endothelial cells	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	14		BW CLOUPE H5	Siling Fu	Feb 02, 2023
GSE183432	PRMT5 Promotes Progression of Chronic Lymphocytic Leukemia	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	61		BW CLOUPE CSV MTX TSV TXT	Janek S Walker	Dec 07, 2022
GSE210938	Single cell ATAC-seq analysis of the kidney in a murine endotoxemia model	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	8		BED CLOUPE H5 TBI TSV	Takashi Hato	Aug 17, 2022
GSE158196	Differential chromatin binding of the lung lineage transcription factor NKX2-1 resolves opposing murine alveolar cell fates in vivo [scATAC-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	1		BED BEDGRAPH BROADPEAK CLOUPE CSV H5 TBI TSV SRA Run Selector	Danielle R. Little	Mar 08, 2021
GSE158205	Differential chromatin binding of the lung lineage transcription factor NKX2-1 resolves opposing murine alveolar cell fates in vivo	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	78		BED BEDGRAPH BROADPEAK CLOUPE CSV H5 NARROWPEAK TBI TSV	Danielle R. Little	Mar 08, 2021
GSE129628	Transcriptional control of lung alveolar type 1 cell development and maintenance by NK Homeobox 2-1	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	21		CLOUPE MTX TSV TXT	Danielle R. Little	Sep 29, 2019
GSE125595	RNA interactions are essential for proper CTCF function	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	24		BW CLOUPE HIC TXT SRA Run Selector	Ricardo Saldana-Meyer	Sep 12, 2019
GSE125671	Pioneer and nonpioneer factor cooperation drives lineage specific chromatin opening	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	24		BIGWIG CLOUPE	Amandine Bemmo	Jul 29, 2019
GSE99521	YY1 is a structural regulator of enhancer-promoter loops	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	47		CLOUPE CSV TSV WIG	Richard A Young	Nov 16, 2017