Accession | Title | Series type(s) | Organism(s) | Samples | GDS | Supplementary | Contact | Release date |
---|---|---|---|---|---|---|---|---|
Filter | Escherichia coli str. K-12 substr. MG1655 | CSV | ||||||
GSE241319 |
Bacterial Stress Bodies – Ancestral Condensates Regulating RNA Turnover and Protein Translation II
|
56 | Lydia Freddolino | Apr 01, 2024 | ||||
GSE241321 |
Bacterial Stress Bodies – Ancestral Condensates Regulating RNA Turnover and Protein Translation III
|
42 | Lydia Freddolino | Apr 01, 2024 | ||||
GSE249682 |
SOS Genes Are Rapidly Induced While Mutagenesis Is Temporally Regulated by Changes in Protein Activation and Nucleotide Pools After a Sub-lethal Dose of Ciprofloxacin in Escherichia coli
|
42 | Amanda Holstad Singleton | Mar 26, 2024 | ||||
GSE213624 |
Genome-wide promoter responses to CRISPR perturbations of regulators reveal regulatory networks in Escherichia coli
|
112 | Yichao Han | Sep 01, 2023 | ||||
GSE211360 |
A three-colour biosensor reveals multimodal stress response at the single cell level and the spatiotemporal dynamics of biofilms.
|
10 | Kersten Rabe | May 29, 2023 | ||||
GSE225096 |
Assessing the effects of four two-component system response regulator knockouts in E. coli
|
30 | Cameron Lamoureux | Feb 12, 2023 | ||||
GSE224989 |
Adaptive laboratory evolution with heterologous pgi
|
16 | Cameron Lamoureux | Feb 09, 2023 | ||||
GSE224889 |
Adaptive laboratory evolution of chorismate synthase knockouts
|
22 | Cameron Lamoureux | Feb 08, 2023 | ||||
GSE222248 |
The E. coli pathobiont LF82 encodes a unique variant of sigma 70 that results in global gene expression changes and altered phenotypes
|
12 | Melissa Arroyo-Mendoza | Jan 10, 2023 | ||||
GSE54902 |
Elucidating transcriptional regulation of nitrogen metabolism with systems approaches [ChIP-Seq]
|
32 |
|
Donghyuk Kim | Jan 05, 2023 | |||
GSE54904 |
Elucidating transcriptional regulation of nitrogen metabolism with systems approaches [RNA-Seq]
|
|
24 |
|
Donghyuk Kim | Jan 05, 2023 | ||
GSE221706 |
Assessing the effects of transcription factor knockouts on growth in high-density fed-batch cultures
|
|
122 | Cameron Lamoureux | Dec 30, 2022 | |||
GSE221314 |
Lab evolution, transcriptomics, and modeling reveal mechanisms of paraquat tolerance
|
84 | Kevin Rychel | Dec 19, 2022 | ||||
GSE194037 |
Alteration of DNA supercoiling serves as a trigger of short-term cold shock repressed genes of E. coli
|
15 | Andre Ribeiro | Jul 20, 2022 | ||||
GSE206047 |
Transcriptional Response to Inducers for E. coli and B. subtilis
|
|
1344 |
|
Joshua Urrutia | Jun 16, 2022 | ||
GSE179913 |
A target expression threshold dictates invader defense and autoimmunity by CRISPR-Cas13 [Genome wide screen]
|
4 |
|
Chase Beisel | Jun 08, 2022 | |||
GSE179914 |
A target expression threshold dictates invader defense and autoimmunity by CRISPR-Cas13 [RNA-seq]
|
4 |
|
Chase Beisel | Jun 08, 2022 | |||
GSE178278 |
The transcription factor network of E. coli steers global responses to shifts in RNAP concentration
|
12 |
|
Andre Sanches Ribeiro | Jun 07, 2022 | |||
GSE178279 |
The transcription factor network of E. coli steers global responses to shifts in RNAP concentration
|
12 |
|
Andre Sanches Ribeiro | Jun 07, 2022 | |||
GSE197447 |
The transcription factor network of E. coli steers global responses to shifts in RNAP concentration
|
12 | Andre Sanches Ribeiro | Jun 07, 2022 |