GEO Browser - GEO

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302 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Non-coding RNA profiling by high throughput sequencing	Arabidopsis thaliana		SRA Run Selector
GSE49325	Characterization of stress-responsive lncRNAs in Arabidopsis thaliana	Non-coding RNA profiling by high throughput sequencing	Arabidopsis thaliana	10	XLSX SRA Run Selector	Zhi John Lu	Sep 18, 2014
GSE52408	Analysis of the RDR6-dependent small RNA profile in ein5 ski2 in Arabidopsis	Non-coding RNA profiling by high throughput sequencing	Arabidopsis thaliana	4	XLSX SRA Run Selector	Damon Lisch	Nov 15, 2016
GSE61439	Pol-IV dependent transcripts in Arabidopsis	Non-coding RNA profiling by high throughput sequencing Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other Genome binding/occupancy profiling by high throughput sequencing	Arabidopsis thaliana	42	XLSX WIG TXT PDF SRA Run Selector	Steve Jacobsen	Sep 13, 2015
GSE66599	Arabidopsis microRNA expression regulation in a wide range of abiotic stress responses	Non-coding RNA profiling by high throughput sequencing	Arabidopsis thaliana	39	XLSX SRA Run Selector	Zofia Szweykowska-Kulińska	Nov 23, 2016
GSE68444	rRNA 5-methylcytosine in Arabidopsis thaliana	Non-coding RNA profiling by high throughput sequencing Other	Arabidopsis thaliana	25	XLSX XLS SRA Run Selector	Alice Louise Burgess	Oct 01, 2015
GSE68445	tRNA 5-methylcytosine in Arabidopsis thaliana	Other Non-coding RNA profiling by high throughput sequencing	Arabidopsis thaliana	11	XLSX XLS SRA Run Selector	Alice Louise Burgess	Oct 01, 2015
GSE68447	Conservation of m5C in rRNA in the kingdom Plantae	Other Non-coding RNA profiling by high throughput sequencing	Arabidopsis thaliana Brassica rapa Caulerpa taxifolia Ginkgo biloba Nannochloropsis oculata Triticum turgidum subsp. durum	13	XLSX SRA Run Selector	Alice Louise Burgess	Oct 01, 2015
GSE68448	Conservation of m5C in tRNAs in the kingdom Plantae	Other Non-coding RNA profiling by high throughput sequencing	Arabidopsis thaliana Brassica rapa Caulerpa taxifolia Ginkgo biloba Nannochloropsis oculata Triticum turgidum subsp. durum	14	XLSX XLS SRA Run Selector	Alice Louise Burgess	Oct 01, 2015
GSE70553	Ago-APP: a GW peptide-based Argonaute affinity capture strategy	Non-coding RNA profiling by high throughput sequencing	Arabidopsis thaliana	2	XLSX TXT SRA Run Selector	Judith Hauptmann	Sep 08, 2015
GSE76406	GC-rich coding sequences reduce transposon-like sRNA-mediated transgene silencing in Arabidopsis and maize	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Arabidopsis thaliana	49	XLSX TXT SRA Run Selector	Blake C. Meyers	Oct 30, 2017
GSE76577	Systematic characterization of novel lncRNAs responding to phosphate starvation in Arabidopsis thaliana	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Arabidopsis thaliana	16	XLSX SRA Run Selector	Jiapei Yuan	Aug 31, 2016
GSE83574	Ethylene induced phosphorylation of CBP20 is involved in root growth [small RNA-seq]	Non-coding RNA profiling by high throughput sequencing	Arabidopsis thaliana	16	XLSX SRA Run Selector	FAN ZHANG	Oct 31, 2016
GSE110510	miRNome dynamics during flower development in Arabidopsis	Non-coding RNA profiling by high throughput sequencing	Arabidopsis thaliana	13	XLSX SRA Run Selector	Dijun Chen	Nov 06, 2018
GSE120709	Global identification of Arabidopsis lncRNAs reveals the regulation of MAF4 by a natural antisense RNA	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Arabidopsis thaliana	82	XLSX TXT SRA Run Selector	Yijun Qi	Dec 11, 2018
GSE124608	Quantification of tRNA-derived fragments in Arabidopsis and rice	Non-coding RNA profiling by high throughput sequencing	Arabidopsis thaliana Oryza sativa	24	XLSX SRA Run Selector	Xuan Ma	Jan 01, 2021
GSE132553	AtDXO1 possesses deNADding and exonuclease activities and plays pleiotropic roles in gene regulation	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Arabidopsis thaliana	21	XLSX CSV SRA Run Selector	Huan ZHONG	Jun 16, 2020
GSE135957	Plant 22-nt siRNAs mediate translational repression and stress adaptation	Non-coding RNA profiling by high throughput sequencing	Arabidopsis thaliana	59	XLSX SRA Run Selector	Bosheng Li	Feb 14, 2020
GSE135959	Plant 22-nt siRNAs mediate translational repression and stress adaptation	Non-coding RNA profiling by high throughput sequencing	Arabidopsis thaliana	12	XLSX SRA Run Selector	Bosheng Li	Feb 14, 2020
GSE148512	22-nucleotide siRNAs mediate translational repression and trigger a silencing storm [es]	Non-coding RNA profiling by high throughput sequencing	Arabidopsis thaliana	8	XLSX SRA Run Selector	Bosheng Li	Apr 13, 2020
GSE148513	22-nucleotide siRNAs mediate translational repression and trigger a silencing storm	Non-coding RNA profiling by high throughput sequencing	Arabidopsis thaliana	18	XLSX SRA Run Selector	Bosheng Li	Apr 13, 2020