GEO Browser - GEO

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28 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter			Nematostella vectensis		SRA Run Selector
GSE132202	Transcriptional remodeling upon light removal in a model cnidarian: losses and gains in gene expression	Expression profiling by high throughput sequencing	Nematostella vectensis	136	TXT SRA Run Selector	Whitney at Leach	Jun 06, 2019
GSE71086	Nematostella vectensis high resolution developmental transcriptomic time-course	Expression profiling by high throughput sequencing	Nematostella vectensis	123	FASTA TXT SRA Run Selector	Itai Yanai	Feb 18, 2016
GSE132526	Decoupling behavioral and transcriptional responses to color in an eyeless cnidarian	Expression profiling by high throughput sequencing	Nematostella vectensis	96	TXT SRA Run Selector	Whitney at Leach	Jun 12, 2019
GSE144080	Gene expression during recovery from different forms of trauma in the sea anemone, Nematostella vectensis	Expression profiling by high throughput sequencing	Nematostella vectensis	84	TXT SRA Run Selector	Whitney at Leach	Jan 23, 2020
GSE167114	Impact of antibiotics, cell-free supernatant, LPS, and live cells on Nematostella vectensis gene expression	Expression profiling by high throughput sequencing	Nematostella vectensis	76	TXT SRA Run Selector	Adam Reitzel	Feb 20, 2021
GSE143861	Global temporal gene expression of Nematostella vectensis in-situ	Expression profiling by high throughput sequencing	Nematostella vectensis	66	TXT SRA Run Selector	Whitney at Leach	Jan 18, 2020
GSE144104	Geographical temperature stress in the sea anemone Nematostella vectensis	Expression profiling by high throughput sequencing	Nematostella vectensis	52	TXT SRA Run Selector	Whitney at Leach	Jan 24, 2020
GSE135498	Sequencing short capped RNAs captures acute transcription initiation and identifies promoter and distal regulatory elements across eukaryotes from total RNA	Other	Capsaspora owczarzaki Homo sapiens Mus musculus Nematostella vectensis Neurospora crassa Oryza sativa	40	BIGWIG BW TXT SRA Run Selector	Christopher Benner	Sep 16, 2019
GSE124016	Convergent evolution of a vertebrate-like methylome in a marine sponge	Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Amphimedon queenslandica Mnemiopsis leidyi Nematostella vectensis Sycon ciliatum	36	CGMAP TXT SRA Run Selector	Alex de Mendoza	Aug 02, 2019
GSE19824	Genome-wide evolutionary analysis of eukaryotic DNA methylation	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Apis mellifera Bombyx mori Chlorella variabilis Ciona intestinalis Coprinopsis cinerea Drosophila melanogaster Laccaria bicolor Nematostella vectensis Oryza sativa Phycomyces blakesleeanus Physcomitrium patens Postia placenta Selaginella moellendorffii Tetraodon nigroviridis Tribolium castaneum Uncinocarpus reesii Volvox carteri	33	GFF TXT SRA Run Selector	Toshiro Nishimura	Apr 15, 2010
GSE175984	Cyclic dinucleotide stimulation of Nematostella vectensis	Expression profiling by high throughput sequencing	Nematostella vectensis	33	TXT SRA Run Selector	Shally Rebecca Margolis	Jun 03, 2021
GSE173786	Spatial transcriptomics reveals a conserved segment polarity program that governs muscle patterning in Nematostella vectensis	Expression profiling by high throughput sequencing	Nematostella vectensis	31	CSV H5 SRA Run Selector	Shiyuan (Cynthia) Chen	Jun 12, 2023
GSE94526	Post transcriptional modifications of miRNAs in the cnidarian Nematostella vectensis	Non-coding RNA profiling by high throughput sequencing	Nematostella vectensis	30	TXT SRA Run Selector	vengamanaidu modepalli	Aug 15, 2017
GSE144203	Unravelling the developmental and functional significance of an ancient Argonaute duplication	Non-coding RNA profiling by high throughput sequencing Expression profiling by high throughput sequencing	Nematostella vectensis	30	XLSX SRA Run Selector	Arie Fridrich	Oct 13, 2020
GSE46488	Evolutionary conservation of the eumetazoan gene regulatory landscape	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Nematostella vectensis	29	BED SRA Run Selector	Michaela Schwaiger	Dec 02, 2013
GSE73545	The evolution of DNA methylation inheritance and programming in animals	Methylation profiling by high throughput sequencing	Apis mellifera Ciona savignyi Nematostella vectensis Strongylocentrotus purpuratus	22	BED SRA Run Selector	jiang liu	Nov 17, 2019
GSE12578	The Early Origins and Evolution of microRNAs and piRNAs in Animals	Non-coding RNA profiling by high throughput sequencing	Amphimedon queenslandica Monosiga brevicollis Nematostella vectensis Trichoplax adhaerens	17	TXT SRA Run Selector	andrew grimson	Oct 01, 2008
GSE182573	An ancestral Wnt-Brachyury feedback loop and vertebrate-specific recruitment of mesoderm-determining target genes revealed by comparative Brachyury target screens	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Nematostella vectensis	17	BED TXT SRA Run Selector	Rohit Anil Dnyansagar	Nov 30, 2022
GSE58769	Early and late response of Nematostella vectensis transcriptome to heavy metals	Expression profiling by high throughput sequencing	Nematostella vectensis	16	TXT SRA Run Selector	Tamar Lotan	Dec 22, 2015
GSE168938	Microbiome mediated plasticity promotes thermal adaptation in Nematostella vectensis	Expression profiling by high throughput sequencing	Nematostella vectensis	15	GFF3 TXT SRA Run Selector	Sebastian Fraune	Feb 04, 2022