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10 series

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Accession	Title	Series type(s)	Organism(s)	Samples	GDS	Supplementary	Contact	Release date
Filter			Bacteroides thetaiotaomicron			TXT
GSE235620	CRISPR-based screening of small RNA modulators of bile susceptibility in Bacteroides thetaiotaomicron	Other	Bacteroides thetaiotaomicron	9		FASTA TXT	Alexander J Westermann	Jun 27, 2023
GSE193734	Transcriptomic analysis of Bacteroides thetaiotaomicron inositol lipid knockout strains	Expression profiling by high throughput sequencing	Bacteroides thetaiotaomicron	8		TXT	Stacey Heaver	Jan 21, 2022
GSE137571	Genome-wide RNA-seq of Bacteroides thetaiotaomicron VPI-5482 grown on ribose	Expression profiling by high throughput sequencing	Bacteroides thetaiotaomicron	6		TXT SRA Run Selector	Eric C Martens	Jan 01, 2020
GSE122256	Detection of carbohydrate-active enzyme genes in the rumen of young lambs	Genome variation profiling by array	Acetivibrio clariflavus Acetivibrio thermocellus Agathobacter rectalis Bacteroides fragilis Bacteroides ovatus Bacteroides sp. Bacteroides thetaiotaomicron Bacteroides xylanisolvens Bifidobacterium adolescentis Bifidobacterium animalis Bifidobacterium longum Butyrivibrio fibrisolvens Butyrivibrio hungatei Cellulomonas fimi Cellulomonas flavigena Cellulosilyticum ruminicola Clostridioides difficile Clostridium acetobutylicum Clostridium beijerinckii Clostridium cellulovorans Enterobacter sp. Enterococcus faecium Epidinium caudatum Epidinium ecaudatum Eudiplodinium maggii Fibrobacter intestinalis Fibrobacter succinogenes Lachnospira eligens Lactococcus lactis Levilactobacillus brevis Limosilactobacillus fermentum Microbiota Neocallimastix frontalis Neocallimastix patriciarum Orpinomyces joyonii Orpinomyces sp. Piromyces communis Piromyces rhizinflatus Piromyces sp. Piromyces sp. 'equi' Polyplastron multivesiculatum Pseudobacteroides cellulosolvens Pseudobutyrivibrio xylanivorans Roseburia hominis Roseburia intestinalis Ruminiclostridium cellulolyticum Ruminococcus albus Ruminococcus champanellensis Ruminococcus flavefaciens Ruminococcus sp. Segatella bryantii Selenomonas ruminantium Xylanibacter ruminicola [Eubacterium] cellulosolvens uncultured Neocallimastigales	6		TXT	Evelyne Forano	Oct 01, 2019
GSE107550	The FibroChip, a functional DNA microarray to monitor cellulolysis and hemicellulolysis activities of rumen microbiota	Expression profiling by array Other	Acetivibrio clariflavus Acetivibrio thermocellus Agathobacter rectalis Bacteroides fragilis Bacteroides ovatus Bacteroides sp. Bacteroides thetaiotaomicron Bacteroides xylanisolvens Bacteroides xylanisolvens XB1A Bifidobacterium adolescentis Bifidobacterium animalis Bifidobacterium longum Butyrivibrio fibrisolvens Butyrivibrio hungatei Cellulomonas fimi Cellulomonas flavigena Cellulosilyticum ruminicola Clostridioides difficile Clostridium acetobutylicum Clostridium beijerinckii Clostridium cellulovorans Enterobacter sp. Enterococcus faecium Epidinium caudatum Epidinium ecaudatum Escherichia coli K-12 Eudiplodinium maggii Fibrobacter intestinalis Fibrobacter succinogenes Fibrobacter succinogenes subsp. succinogenes S85 Lachnospira eligens Lactococcus lactis Levilactobacillus brevis Limosilactobacillus fermentum Neocallimastix frontalis Neocallimastix patriciarum Orpinomyces joyonii Orpinomyces sp. Piromyces communis Piromyces rhizinflatus Piromyces sp. Piromyces sp. 'equi' Polyplastron multivesiculatum Pseudobacteroides cellulosolvens Pseudobutyrivibrio xylanivorans Roseburia hominis Roseburia intestinalis Ruminiclostridium cellulolyticum Ruminococcus albus Ruminococcus champanellensis Ruminococcus flavefaciens Ruminococcus sp. Segatella bryantii Selenomonas ruminantium Xylanibacter ruminicola [Eubacterium] cellulosolvens bovine gut metagenome uncultured Neocallimastigales	14		TXT	Sophie Comtet-Marre	Dec 01, 2017
GSE65449	Characterizing the interactions between a naturally-primed IgA and its conserved Bacteroides thetaiotaomicron species-specific epitope in gnotobiotic mice [RNA-Seq]	Expression profiling by high throughput sequencing	Bacteroides thetaiotaomicron	10		TXT SRA Run Selector	Joseph D Planer	Jun 29, 2015
GSE65456	Characterizing the interactions between a naturally-primed IgA (mAb 260.8) and its conserved Bacteroides thetaiotaomicron species-specific epitope in gnotobiotic mice	Expression profiling by high throughput sequencing Expression profiling by array	Agathobacter rectalis Bacteroides thetaiotaomicron Lachnospira eligens Methanobrevibacter smithii Parabacteroides distasonis Phocaeicola vulgatus	22		CEL TXT	Joseph D Planer	Jun 29, 2015
GSE26772	In vitro transcriptional profiling of Bacteroides thetaiotaomicron in lactose, galactose and human milk oligosaccharides	Expression profiling by array Third-party reanalysis	Bacteroides thetaiotaomicron Bifidobacterium longum	8		CEL TXT	Angela M Marcobal	Jan 01, 2013
GSE25537	Methanobrevibacter smithii expression profiling	Expression profiling by array Expression profiling by high throughput sequencing	Agathobacter rectalis Bacteroides thetaiotaomicron Lachnospira eligens Methanobrevibacter smithii Methanobrevibacter smithii ATCC 35061 Parabacteroides distasonis Phocaeicola vulgatus	80		CEL TXT	Federico E Rey	Nov 07, 2011
GSE17712	Identifying genetic determinants needed to establish a human gut symbiont in its habitat	Other	Bacteroides thetaiotaomicron	59		TXT	Andrew L Goodman	Sep 16, 2009