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| Status |
Public on Jan 21, 2022 |
| Title |
Transcriptomic analysis of Bacteroides thetaiotaomicron inositol lipid knockout strains |
| Organism |
Bacteroides thetaiotaomicron |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
We report next generation sequencing RNA-seq data of human gut commensal Bacteroides thetaiotaomicron strains deficient in inositol lipid synthesis, including dBT_1522 (phosphoinositol dihydroceramide synthase knockout) and its wild-type background strain, and iSPTdBT_1526 (myo-inositol-phosphate synthase) knockout with its background strain ("iSPT," inducible serine palmitoyltransferase).
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| Overall design |
Whole cell RNA-seq profiles of Bacteroides thetaiotaomicron grown 15 hours in minimal medium at 37 deg C.
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| Contributor(s) |
Heaver SL, Ley RE |
| Citation(s) |
35725777 |
| |
| Submission date |
Jan 14, 2022 |
| Last update date |
Jun 22, 2022 |
| Contact name |
Stacey Heaver |
| Organization name |
Max Planck Institute for Biology Tuebingen
|
| Department |
Microbiome Science
|
| Street address |
Max-Planck-Ring 5
|
| City |
Tuebingen |
| ZIP/Postal code |
72076 |
| Country |
Germany |
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| Platforms (1) |
| GPL31230 |
Illumina HiSeq 3000 (Bacteroides thetaiotaomicron) |
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| Samples (8)
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| Relations |
| BioProject |
PRJNA797434 |
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