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51 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter			Lactococcus lactis
GSE255719	Unveiling the regulatory network controlling natural transformation in lactococci	Expression profiling by high throughput sequencing	Lactococcus lactis	6	TXT XLSX	Frédéric Toussaint	Jun 13, 2024
GSE231968	Ribosome profiling experiment characterising early response of Lactococcus Lactis infected in sk1 bacteriophage	Expression profiling by high throughput sequencing	Lactococcus lactis	16	TSV XLS	Martina Yordonova	Feb 26, 2024
GSE229414	Control of bacterial phenotype and chromosomal gene expression by single plasmids of Lactococcus lactis IL594	Expression profiling by array	Lactococcus lactis	16	TXT	Marek Skoneczny	Apr 16, 2023
GSE209756	The presence of plasmids in L. lactis IL594 determines changes in host phenotype and expression of chromosomal genes	Expression profiling by array	Lactococcus lactis	12	TXT	Marek Skoneczny	Jul 27, 2022
GSE139902	ChIP-seq for transcriptional regulator CodY of Lactococcus lactis	Genome binding/occupancy profiling by high throughput sequencing	Lactococcus lactis	2	XLS SRA Run Selector	Hao Wu	Jan 28, 2022
GSE116952	Transcriptome analysis of Lactococcus lactis in response to acid stress	Expression profiling by high throughput sequencing	Lactococcus lactis	4	TXT SRA Run Selector	ming zheng zhu	Jul 11, 2021
GSE147695	L. lactis cultures: control vs diacetyl-induced	Expression profiling by array	Lactococcus cremoris Lactococcus lactis	6	GPR XLSX	Jhonatan Alejandro HernandezValdes	Mar 30, 2020
GSE147696	L. lactis cultures: control vs acetaldehyde-induced	Expression profiling by array	Lactococcus cremoris Lactococcus lactis	6	GPR XLSX	Jhonatan Alejandro HernandezValdes	Mar 30, 2020
GSE122256	Detection of carbohydrate-active enzyme genes in the rumen of young lambs	Genome variation profiling by array	Acetivibrio clariflavus Acetivibrio thermocellus Agathobacter rectalis Bacteroides fragilis Bacteroides ovatus Bacteroides sp. Bacteroides thetaiotaomicron Bacteroides xylanisolvens Bifidobacterium adolescentis Bifidobacterium animalis Bifidobacterium longum Butyrivibrio fibrisolvens Butyrivibrio hungatei Cellulomonas fimi Cellulomonas flavigena Cellulosilyticum ruminicola Clostridioides difficile Clostridium acetobutylicum Clostridium beijerinckii Clostridium cellulovorans Enterobacter sp. Enterococcus faecium Epidinium caudatum Epidinium ecaudatum Eudiplodinium maggii Fibrobacter intestinalis Fibrobacter succinogenes Lachnospira eligens Lactococcus lactis Levilactobacillus brevis Limosilactobacillus fermentum Microbiota Neocallimastix frontalis Neocallimastix patriciarum Orpinomyces joyonii Orpinomyces sp. Piromyces communis Piromyces rhizinflatus Piromyces sp. Piromyces sp. 'equi' Polyplastron multivesiculatum Pseudobacteroides cellulosolvens Pseudobutyrivibrio xylanivorans Roseburia hominis Roseburia intestinalis Ruminiclostridium cellulolyticum Ruminococcus albus Ruminococcus champanellensis Ruminococcus flavefaciens Ruminococcus sp. Segatella bryantii Selenomonas ruminantium Xylanibacter ruminicola [Eubacterium] cellulosolvens uncultured Neocallimastigales	6	TXT	Evelyne Forano	Oct 01, 2019
GSE107135	Effects of acid stress on gene transcription of L.lactis strain F44	Expression profiling by high throughput sequencing	Lactococcus lactis	2	FA GFF XLSX SRA Run Selector	Kairen Tian	Nov 20, 2018
GSE107136	Effects of acid stress on gene transcription of L.lactis strain G423	Expression profiling by high throughput sequencing	Lactococcus lactis	2	FA GFF TXT XLSX SRA Run Selector	Kairen Tian	Nov 20, 2018
GSE107137	Transcriptome analysis of L.lactis F44 and G423: insights into adaptation to acidic environment	Expression profiling by high throughput sequencing	Lactococcus lactis	4		Kairen Tian	Nov 20, 2018
GSE119647	Transcriptome analysis of a spray drying-resistant subpopulation reveals a zinc-dependent mechanism for robustness in L. lactis SK11	Expression profiling by high throughput sequencing	Lactococcus lactis	12	TXT SRA Run Selector	Annereinou Dijkstra	Sep 08, 2018
GSE101424	Transcriptome analysis of the transcriptional regulator YthA effecting on lactococcus lactis	Expression profiling by high throughput sequencing	Lactococcus lactis	2	XLS SRA Run Selector	liu jingui	Mar 14, 2018
GSE107550	The FibroChip, a functional DNA microarray to monitor cellulolysis and hemicellulolysis activities of rumen microbiota	Expression profiling by array Other	Acetivibrio clariflavus Acetivibrio thermocellus Agathobacter rectalis Bacteroides fragilis Bacteroides ovatus Bacteroides sp. Bacteroides thetaiotaomicron Bacteroides xylanisolvens Bacteroides xylanisolvens XB1A Bifidobacterium adolescentis Bifidobacterium animalis Bifidobacterium longum Butyrivibrio fibrisolvens Butyrivibrio hungatei Cellulomonas fimi Cellulomonas flavigena Cellulosilyticum ruminicola Clostridioides difficile Clostridium acetobutylicum Clostridium beijerinckii Clostridium cellulovorans Enterobacter sp. Enterococcus faecium Epidinium caudatum Epidinium ecaudatum Escherichia coli K-12 Eudiplodinium maggii Fibrobacter intestinalis Fibrobacter succinogenes Fibrobacter succinogenes subsp. succinogenes S85 Lachnospira eligens Lactococcus lactis Levilactobacillus brevis Limosilactobacillus fermentum Neocallimastix frontalis Neocallimastix patriciarum Orpinomyces joyonii Orpinomyces sp. Piromyces communis Piromyces rhizinflatus Piromyces sp. Piromyces sp. 'equi' Polyplastron multivesiculatum Pseudobacteroides cellulosolvens Pseudobutyrivibrio xylanivorans Roseburia hominis Roseburia intestinalis Ruminiclostridium cellulolyticum Ruminococcus albus Ruminococcus champanellensis Ruminococcus flavefaciens Ruminococcus sp. Segatella bryantii Selenomonas ruminantium Xylanibacter ruminicola [Eubacterium] cellulosolvens bovine gut metagenome uncultured Neocallimastigales	14	TXT	Sophie Comtet-Marre	Dec 01, 2017
GSE98499	Early Transcriptome Response of Lactococcus lactis to Environmental Stresses Reveals Differentially Expressed Small Regulatory RNAs	Expression profiling by high throughput sequencing	Lactococcus lactis	18	FASTA GFF TXT SRA Run Selector	Anne de Jong	Jul 03, 2017
GSE89508	Gene expression signature in Lactococcus lactis after ethanol, butanol or hexanol exposure	Expression profiling by array	Lactococcus cremoris subsp. cremoris MG1363 Lactococcus lactis	18	TXT	Mogens Kilstrup	Nov 04, 2016
GSE78882	Gene expression signature after abrupt glucose starvation in Lactococcus lactis	Expression profiling by array	Lactococcus cremoris subsp. cremoris MG1363 Lactococcus lactis	8	TXT	Mogens Kilstrup	Mar 04, 2016
GSE55336	Relative tRNA abundance in Lactococcus lactis as a function of growth rate and overexpression stress	Non-coding RNA profiling by array	Lactococcus lactis	14	TXT	Paul Georg Saffert	Feb 18, 2016
GSE76764	Lactococcus lactis MG1363 ∆guaA versus L. lactis MG1363 (wt)	Expression profiling by array	Lactococcus cremoris subsp. cremoris MG1363 Lactococcus lactis	1	TXT	Ana Solopova	Jan 12, 2016