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16 series

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Accession	Title	Series type(s)	Organism(s)	Samples	GDS	Supplementary	Contact	Release date
Filter			Lactobacillus acidophilus
GSE255317	Study of microbial species in extracellular vesicles of sclerosis multiple patients	Expression profiling by high throughput sequencing	Bifidobacterium animalis subsp. lactis Homo sapiens Lactobacillus acidophilus synthetic construct	15		CSV	Alex Martínez Ascensión	May 07, 2024
GSE44752	The human Gut Chip “HuGChip”, an explorative phylogenetic microarray for determining gut microbiome diversity at Family level	Expression profiling by array	Bacteroides fragilis Blautia coccoides Escherichia coli Lactobacillus acidophilus [Clostridium] leptum human gut metagenome uncultured bacterium	4		TXT	Nicolas Parisot	Mar 01, 2013
GSE23945	Lactobacillus plantarum IMDO 130201, a wheat sourdough isolate, adapts to growth in wheat sourdough simulation medium at different pH values through differential gene expression	Expression profiling by array	Bifidobacterium Brevibacterium linens Companilactobacillus alimentarius Companilactobacillus farciminis Companilactobacillus mindensis Companilactobacillus paralimentarius Enterococcus casseliflavus Enterococcus faecalis Enterococcus faecium Enterococcus hirae Enterococcus mundtii Fructilactobacillus fructivorans Fructilactobacillus sanfranciscensis Furfurilactobacillus rossiae Lacticaseibacillus casei Lacticaseibacillus paracasei Lacticaseibacillus rhamnosus Lactiplantibacillus paraplantarum Lactiplantibacillus pentosus Lactiplantibacillus plantarum Lactobacillus acidophilus Lactobacillus amylovorus Lactobacillus crispatus Lactobacillus delbrueckii Lactobacillus gasseri Lactobacillus helveticus Lactobacillus johnsonii Lactococcus lactis Latilactobacillus curvatus Latilactobacillus sakei Lentilactobacillus buchneri Lentilactobacillus hilgardii Lentilactobacillus parabuchneri Leuconostoc citreum Leuconostoc mesenteroides Leuconostoc pseudomesenteroides Levilactobacillus brevis Limosilactobacillus fermentum Limosilactobacillus frumenti Limosilactobacillus panis Limosilactobacillus pontis Limosilactobacillus reuteri Mammaliicoccus lentus Oenococcus oeni Pediococcus acidilactici Pediococcus pentosaceus Staphylococcus aureus Streptococcus thermophilus Weissella confusa	10		TXT	Rekin's Janky	Aug 01, 2011
GSE15686	Meta-transcriptome analysis of a natural wheat sourdough ecosystem during a 10-day spontaneous laboratory fermentation	Expression profiling by array	Bifidobacterium Brevibacterium linens Companilactobacillus alimentarius Companilactobacillus farciminis Companilactobacillus mindensis Companilactobacillus paralimentarius Enterococcus casseliflavus Enterococcus faecalis Enterococcus faecium Enterococcus hirae Enterococcus mundtii Fructilactobacillus fructivorans Fructilactobacillus sanfranciscensis Furfurilactobacillus rossiae Lacticaseibacillus casei Lacticaseibacillus paracasei Lacticaseibacillus rhamnosus Lactiplantibacillus paraplantarum Lactiplantibacillus pentosus Lactiplantibacillus plantarum Lactobacillus acidophilus Lactobacillus amylovorus Lactobacillus crispatus Lactobacillus delbrueckii Lactobacillus gasseri Lactobacillus helveticus Lactobacillus johnsonii Lactococcus lactis Latilactobacillus curvatus Latilactobacillus sakei Lentilactobacillus buchneri Lentilactobacillus hilgardii Lentilactobacillus parabuchneri Leuconostoc citreum Leuconostoc mesenteroides Leuconostoc pseudomesenteroides Levilactobacillus brevis Limosilactobacillus fermentum Limosilactobacillus frumenti Limosilactobacillus panis Limosilactobacillus pontis Limosilactobacillus reuteri Mammaliicoccus lentus Oenococcus oeni Pediococcus acidilactici Pediococcus pentosaceus Staphylococcus aureus Streptococcus thermophilus Weissella confusa	9		TXT	Rekin's Janky	Jul 07, 2010
GSE15691	Meta-transcriptome analysis of a natural spelt sourdough ecosystem during a 10-day spontaneous laboratory fermentation	Expression profiling by array	Bifidobacterium Brevibacterium linens Companilactobacillus alimentarius Companilactobacillus farciminis Companilactobacillus mindensis Companilactobacillus paralimentarius Enterococcus casseliflavus Enterococcus faecalis Enterococcus faecium Enterococcus hirae Enterococcus mundtii Fructilactobacillus fructivorans Fructilactobacillus sanfranciscensis Furfurilactobacillus rossiae Lacticaseibacillus casei Lacticaseibacillus paracasei Lacticaseibacillus rhamnosus Lactiplantibacillus paraplantarum Lactiplantibacillus pentosus Lactiplantibacillus plantarum Lactobacillus acidophilus Lactobacillus amylovorus Lactobacillus crispatus Lactobacillus delbrueckii Lactobacillus gasseri Lactobacillus helveticus Lactobacillus johnsonii Lactococcus lactis Latilactobacillus curvatus Latilactobacillus sakei Lentilactobacillus buchneri Lentilactobacillus hilgardii Lentilactobacillus parabuchneri Leuconostoc citreum Leuconostoc mesenteroides Leuconostoc pseudomesenteroides Levilactobacillus brevis Limosilactobacillus fermentum Limosilactobacillus frumenti Limosilactobacillus panis Limosilactobacillus pontis Limosilactobacillus reuteri Mammaliicoccus lentus Oenococcus oeni Pediococcus acidilactici Pediococcus pentosaceus Staphylococcus aureus Streptococcus thermophilus Weissella confusa	7		TXT	Rekin's Janky	Jul 07, 2010
GSE15692	Meta-transcriptome analysis of a natural spelt sourdough ecosystem during a 10-day spontaneous laboratory fermentation.	Expression profiling by array	Bifidobacterium Brevibacterium linens Companilactobacillus alimentarius Companilactobacillus farciminis Companilactobacillus mindensis Companilactobacillus paralimentarius Enterococcus casseliflavus Enterococcus faecalis Enterococcus faecium Enterococcus hirae Enterococcus mundtii Fructilactobacillus fructivorans Fructilactobacillus sanfranciscensis Furfurilactobacillus rossiae Lacticaseibacillus casei Lacticaseibacillus paracasei Lacticaseibacillus rhamnosus Lactiplantibacillus paraplantarum Lactiplantibacillus pentosus Lactiplantibacillus plantarum Lactobacillus acidophilus Lactobacillus amylovorus Lactobacillus crispatus Lactobacillus delbrueckii Lactobacillus gasseri Lactobacillus helveticus Lactobacillus johnsonii Lactococcus lactis Latilactobacillus curvatus Latilactobacillus sakei Lentilactobacillus buchneri Lentilactobacillus hilgardii Lentilactobacillus parabuchneri Leuconostoc citreum Leuconostoc mesenteroides Leuconostoc pseudomesenteroides Levilactobacillus brevis Limosilactobacillus fermentum Limosilactobacillus frumenti Limosilactobacillus panis Limosilactobacillus pontis Limosilactobacillus reuteri Mammaliicoccus lentus Oenococcus oeni Pediococcus acidilactici Pediococcus pentosaceus Staphylococcus aureus Streptococcus thermophilus Weissella confusa	9		TXT	Rekin's Janky	Jul 07, 2010
GSE15693	Meta-transcriptome analysis of a natural wheat sourdough ecosystem during a 10-day spontaneous, laboratory fermentation	Expression profiling by array	Bifidobacterium Brevibacterium linens Companilactobacillus alimentarius Companilactobacillus farciminis Companilactobacillus mindensis Companilactobacillus paralimentarius Enterococcus casseliflavus Enterococcus faecalis Enterococcus faecium Enterococcus hirae Enterococcus mundtii Fructilactobacillus fructivorans Fructilactobacillus sanfranciscensis Furfurilactobacillus rossiae Lacticaseibacillus casei Lacticaseibacillus paracasei Lacticaseibacillus rhamnosus Lactiplantibacillus paraplantarum Lactiplantibacillus pentosus Lactiplantibacillus plantarum Lactobacillus acidophilus Lactobacillus amylovorus Lactobacillus crispatus Lactobacillus delbrueckii Lactobacillus gasseri Lactobacillus helveticus Lactobacillus johnsonii Lactococcus lactis Latilactobacillus curvatus Latilactobacillus sakei Lentilactobacillus buchneri Lentilactobacillus hilgardii Lentilactobacillus parabuchneri Leuconostoc citreum Leuconostoc mesenteroides Leuconostoc pseudomesenteroides Levilactobacillus brevis Limosilactobacillus fermentum Limosilactobacillus frumenti Limosilactobacillus panis Limosilactobacillus pontis Limosilactobacillus reuteri Mammaliicoccus lentus Oenococcus oeni Pediococcus acidilactici Pediococcus pentosaceus Staphylococcus aureus Streptococcus thermophilus Weissella confusa	9		TXT	Rekin's Janky	Jul 07, 2010
GSE15803	Analysis of natural wheat and spelt sourdough ecosystem during a 10-day spontaneous laboratory fermentation	Expression profiling by array	Bifidobacterium Brevibacterium linens Companilactobacillus alimentarius Companilactobacillus farciminis Companilactobacillus mindensis Companilactobacillus paralimentarius Enterococcus casseliflavus Enterococcus faecalis Enterococcus faecium Enterococcus hirae Enterococcus mundtii Fructilactobacillus fructivorans Fructilactobacillus sanfranciscensis Furfurilactobacillus rossiae Lacticaseibacillus casei Lacticaseibacillus paracasei Lacticaseibacillus rhamnosus Lactiplantibacillus paraplantarum Lactiplantibacillus pentosus Lactiplantibacillus plantarum Lactobacillus acidophilus Lactobacillus amylovorus Lactobacillus crispatus Lactobacillus delbrueckii Lactobacillus gasseri Lactobacillus helveticus Lactobacillus johnsonii Lactococcus lactis Latilactobacillus curvatus Latilactobacillus sakei Lentilactobacillus buchneri Lentilactobacillus hilgardii Lentilactobacillus parabuchneri Leuconostoc citreum Leuconostoc mesenteroides Leuconostoc pseudomesenteroides Levilactobacillus brevis Limosilactobacillus fermentum Limosilactobacillus frumenti Limosilactobacillus panis Limosilactobacillus pontis Limosilactobacillus reuteri Mammaliicoccus lentus Oenococcus oeni Pediococcus acidilactici Pediococcus pentosaceus Staphylococcus aureus Streptococcus thermophilus Weissella confusa	34		TXT	Rekin's Janky	Jul 07, 2010
GSE5674	Influence of environmental conditions and AI2 on the adhesion adaptive response of Lactobacillus acidophilus NCFM	Expression profiling by array	Lactobacillus acidophilus	4			Todd Robert Klaenhammer	Feb 09, 2010
GSE9082	DNA validation of LAB 2k v2	Genome variation profiling by array	Bifidobacterium Brevibacterium linens Companilactobacillus alimentarius Companilactobacillus farciminis Companilactobacillus mindensis Companilactobacillus paralimentarius Enterococcus casseliflavus Enterococcus faecalis Enterococcus faecium Enterococcus hirae Enterococcus mundtii Fructilactobacillus fructivorans Fructilactobacillus sanfranciscensis Furfurilactobacillus rossiae Lacticaseibacillus casei Lacticaseibacillus paracasei Lacticaseibacillus rhamnosus Lactiplantibacillus paraplantarum Lactiplantibacillus pentosus Lactiplantibacillus plantarum Lactobacillus acidophilus Lactobacillus amylovorus Lactobacillus crispatus Lactobacillus delbrueckii Lactobacillus gasseri Lactobacillus helveticus Lactobacillus johnsonii Lactococcus lactis Latilactobacillus curvatus Latilactobacillus sakei Lentilactobacillus buchneri Lentilactobacillus hilgardii Lentilactobacillus parabuchneri Leuconostoc citreum Leuconostoc mesenteroides Leuconostoc pseudomesenteroides Levilactobacillus brevis Limosilactobacillus fermentum Limosilactobacillus frumenti Limosilactobacillus panis Limosilactobacillus pontis Limosilactobacillus reuteri Mammaliicoccus lentus Oenococcus oeni Pediococcus acidilactici Pediococcus pentosaceus Staphylococcus aureus Streptococcus thermophilus Weissella confusa	40		TXT	Rekin's Janky	Oct 20, 2009
GSE9140	RNA validation of LAB 2k v2	Expression profiling by array	Bifidobacterium Brevibacterium linens Companilactobacillus alimentarius Companilactobacillus farciminis Companilactobacillus mindensis Companilactobacillus paralimentarius Enterococcus casseliflavus Enterococcus faecalis Enterococcus faecium Enterococcus hirae Enterococcus mundtii Fructilactobacillus fructivorans Fructilactobacillus sanfranciscensis Furfurilactobacillus rossiae Lacticaseibacillus casei Lacticaseibacillus paracasei Lacticaseibacillus rhamnosus Lactiplantibacillus paraplantarum Lactiplantibacillus pentosus Lactiplantibacillus plantarum Lactobacillus acidophilus Lactobacillus amylovorus Lactobacillus crispatus Lactobacillus delbrueckii Lactobacillus gasseri Lactobacillus helveticus Lactobacillus johnsonii Lactococcus lactis Latilactobacillus curvatus Latilactobacillus sakei Lentilactobacillus buchneri Lentilactobacillus hilgardii Lentilactobacillus parabuchneri Leuconostoc citreum Leuconostoc mesenteroides Leuconostoc pseudomesenteroides Levilactobacillus brevis Limosilactobacillus fermentum Limosilactobacillus frumenti Limosilactobacillus panis Limosilactobacillus pontis Limosilactobacillus reuteri Mammaliicoccus lentus Oenococcus oeni Pediococcus acidilactici Pediococcus pentosaceus Staphylococcus aureus Streptococcus thermophilus Weissella confusa	20		TXT	Rekin's Janky	Oct 20, 2009
GSE12924	Temporal gene expression and probiotic attributes of Lactobacillus acidophilus during growth in milk	Expression profiling by array	Lactobacillus acidophilus Lactobacillus acidophilus NCFM	6			Todd Robert Klaenhammer	Mar 24, 2009
GSE11048	Genome-wide transcriptional profiling of Lactobacillus acidophilus' response to bile	Expression profiling by array	Lactobacillus acidophilus Lactobacillus acidophilus NCFM	2		TXT	Todd Robert Klaenhammer	Apr 05, 2008
GSE2577	Transcriptional analysis of carbohydrate utilization by Lactobacillus acidophilus using whole-genome microarrays	Expression profiling by array	Lactobacillus acidophilus	28			Todd Robert Klaenhammer	Aug 07, 2006
GSE2782	Genome-wide transcriptional profiling of Lactobacillus acidophilus stress response	Expression profiling by array	Lactobacillus acidophilus	2			Todd Robert Klaenhammer	Dec 08, 2005
GSE1976	Acid sensitivity and opp transport regulation in L. acidophilus	Expression profiling by array	Lactobacillus acidophilus	6			Todd Robert Klaenhammer	Mar 15, 2005