|
Status |
Public on Dec 08, 2005 |
Title |
Genome-wide transcriptional profiling of Lactobacillus acidophilus stress response |
Organism |
Lactobacillus acidophilus |
Experiment type |
Expression profiling by array
|
Summary |
We used a whole genome array containing 97.4 % of the annotated genes of Lactobacillus acidophilus NCFM, a probiotic culture that belongs to the lactic acid bacteria group, to identify genes that are differentially expressed under several stress conditions. Keywords: Stress response
|
|
|
Overall design |
We used a Reference Sample design, where each sample was compared using a dye swap to a common reference sample (early log-phase L. acidophilus cultures resuspended in fresh MRS [pH ~6.8]).
|
|
|
Contributor(s) |
Azcarate-Peril MA, Klaenhammer TR |
Citation(s) |
16517636 |
|
Submission date |
Jun 08, 2005 |
Last update date |
Mar 16, 2012 |
Contact name |
Todd Robert Klaenhammer |
E-mail(s) |
trk@ncsu.edu, yjgoh@ncsu.edu, sjoflahe@ncsu.edu
|
Phone |
919-515-2972
|
Fax |
919 513 0014
|
Organization name |
North Carolina State University
|
Department |
Department of Food, Bioprocessing, and Nutrition Sciences
|
Street address |
|
City |
Raleigh |
State/province |
NC |
ZIP/Postal code |
27695 |
Country |
USA |
|
|
Platforms (1) |
GPL1401 |
Whole Genome Array L. acidophilus NCFM |
|
Samples (2) |
GSM60519 |
1% ammonium oxalate_pH 6.8_rep1 |
GSM60522 |
1% ammonium oxalate_pH 6.8_rep2 |
|
Relations |
BioProject |
PRJNA92321 |