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| Status |
Public on Dec 08, 2005 |
| Title |
Genome-wide transcriptional profiling of Lactobacillus acidophilus stress response |
| Organism |
Lactobacillus acidophilus |
| Experiment type |
Expression profiling by array
|
| Summary |
We used a whole genome array containing 97.4 % of the annotated genes of Lactobacillus acidophilus NCFM, a probiotic culture that belongs to the lactic acid bacteria group, to identify genes that are differentially expressed under several stress conditions.
Keywords: Stress response
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| Overall design |
We used a Reference Sample design, where each sample was compared using a dye swap to a common reference sample (early log-phase L. acidophilus cultures resuspended in fresh MRS [pH ~6.8]).
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| |
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| Contributor(s) |
Azcarate-Peril MA, Klaenhammer TR |
| Citation(s) |
16517636 |
| |
| Submission date |
Jun 08, 2005 |
| Last update date |
Mar 16, 2012 |
| Contact name |
Todd Robert Klaenhammer |
| E-mail(s) |
trk@ncsu.edu, yjgoh@ncsu.edu, sjoflahe@ncsu.edu
|
| Phone |
919-515-2972
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| Fax |
919 513 0014
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| Organization name |
North Carolina State University
|
| Department |
Department of Food, Bioprocessing, and Nutrition Sciences
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| Street address |
|
| City |
Raleigh |
| State/province |
NC |
| ZIP/Postal code |
27695 |
| Country |
USA |
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| Platforms (1) |
| GPL1401 |
Whole Genome Array L. acidophilus NCFM |
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| Samples (2) |
| GSM60519 |
1% ammonium oxalate_pH 6.8_rep1 |
| GSM60522 |
1% ammonium oxalate_pH 6.8_rep2 |
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| Relations |
| BioProject |
PRJNA92321 |
