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250 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter			Vitis vinifera
GSE130994	small RNA NGS based diagnostic survey of Hungarian grapevine rootstock plantations	Other	Vitis vinifera	19	TXT SRA Run Selector	Éva Várallyay	Feb 24, 2020
GSE31594	short term abiotic stress Cabernet Sauvignon	Expression profiling by array	Vitis vinifera	48	CEL	PLEXdb Curator, Sudhansu Dash	Aug 23, 2011
GSE18406	microRNA-target RNA pairs revealed by Parallel analysis of RNA ends in Vitis vinifera	Non-coding RNA profiling by high throughput sequencing	Vitis vinifera	1	SRA Run Selector	Simon Moxon	Apr 29, 2010
GSE116581	fruitENCODE: An encyclopedia of DNA elements for fruit ripening	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Arabidopsis thaliana Carica papaya Citrullus lanatus Cucumis melo Cucumis sativus Fragaria vesca Malus domestica Musa acuminata AAA Group Oryza sativa Prunus persica Pyrus x bretschneideri Solanum lycopersicum Vitis vinifera	282	BW NARROWPEAK TBI TXT SRA Run Selector	Silin Zhong	Jul 04, 2018
GSE87296	cold stress -Impact of cold stress on grapevine inflorescence	Expression profiling by array	Vitis vinifera	24	PAIR	Soubigou-Taconnat Ludivine	Oct 01, 2016
GSE152164	Xylella fastidiosa causes transcriptional shifts that precede tylose formation and starch depletion in xylem	Expression profiling by high throughput sequencing	Vitis vinifera	12	TXT SRA Run Selector	Mélanie Massonnet	Jan 19, 2021
GSE79526	Widespread natural variation of DNA methylation within angiosperms	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Beta vulgaris Brachypodium distachyon Brassica rapa Cannabis sativa Citrus x clementina Cucumis sativus Erythranthe guttata Eucalyptus grandis Eutrema salsugineum Fragaria vesca Lotus japonicus Malus domestica Manihot esculenta Medicago truncatula Panicum hallii Panicum virgatum Populus trichocarpa Prunus persica Ricinus communis Setaria viridis Sorghum bicolor Theobroma cacao Vitis vinifera	34	TSV SRA Run Selector	Robert J Schmitz	Sep 02, 2016
GSE116740	Whole-transcriptome microarray analysis of grapevine-Botrytis cinerea interaction during latent infection of berries (“noble rot”)	Expression profiling by array	Vitis vinifera	15	TXT	Teresa Colombo	Jul 26, 2019
GSE116741	Whole-transcriptome analysis of grapevine-Botrytis cinerea interaction during latent infection of berries	Expression profiling by array Expression profiling by high throughput sequencing	Botrytis cinerea Vitis vinifera	24	TXT	Teresa Colombo	Jul 26, 2019
GSE116274	Whole-transcriptome RNA-seq analysis of grapevine-Botrytis cinerea interaction during latent infection of berries (“noble rot”)	Expression profiling by high throughput sequencing	Botrytis cinerea Vitis vinifera	9	XLS	Teresa Colombo	Jul 26, 2019
GSE92864	Whole Plant Temperature Manipulation Affects Flavonoid Metabolism and the Transcriptome of Grapevine Berries	Expression profiling by array	Vitis vinifera	27	PAIR	Silvia Dal Santo	Jun 14, 2017
GSE66391	Water limitation and rootstock genotype interact to alter grape berry metabolism through transcriptome reprogramming	Expression profiling by array	Vitis vinifera	48	PAIR	Christian Kappel	Mar 19, 2015
GSE121146	Volatile profiles and transcriptomic variation in Cabernet Sauvignon grapes in response to various sunlight exposure strategies in a warm climate	Expression profiling by high throughput sequencing	Vitis vinifera	27	TXT SRA Run Selector	Lei He	Oct 14, 2018
GSE164584	Vitis vinifera embryogenic callus epigenomics (small RNA data)	Non-coding RNA profiling by high throughput sequencing	Vitis vinifera	2	GFF3 SRA Run Selector	Darrell Karl Lizamore	Aug 27, 2021
GSE164582	Vitis vinifera embryogenic callus epigenomics (WGBS data)	Methylation profiling by high throughput sequencing	Vitis vinifera	2	TAB TXT SRA Run Selector	Darrell Karl Lizamore	Aug 27, 2021
GSE164583	Vitis vinifera embryogenic callus epigenomics (RNA-seq)	Expression profiling by high throughput sequencing	Vitis vinifera	6	TXT SRA Run Selector	Darrell Karl Lizamore	Aug 27, 2021
GSE164586	Vitis vinifera embryogenic callus epigenomics	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Vitis vinifera	10	GFF3	Darrell Karl Lizamore	Aug 27, 2021
GSE6404	V. vinifera 'Cabernet sauvignon' and V. aestivalis 'Norton' innoculated with Erysiphe necator conidiospores	Expression profiling by array	Vitis aestivalis Vitis vinifera	72	CEL	Wenping Qiu	Nov 29, 2007
GSE71146	Using the combined analysis of transcripts and metabolites to propose key genes for differential terpene accumulation across two regions	Expression profiling by high throughput sequencing	Vitis vinifera	16	TXT SRA Run Selector	Qiu-hong Pan	Jul 22, 2015
GSE33384	Unique small RNA expressed during grapevine floral development	Non-coding RNA profiling by high throughput sequencing	Vitis vinifera	11	TAB SRA Run Selector	Mark Raymond Thomas	Nov 22, 2018