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9 series

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Accession	Title	Series type(s)	Organism(s)	Samples	GDS	Supplementary	Contact	Release date
Filter			Hepacivirus hominis
GSE18919	Therapeutic silencing of microRNA-122 in primates with chronic hepatitis C virus infection	Non-coding RNA profiling by high throughput sequencing	Hepacivirus hominis	16		FNA QUAL TXT	Andreas Petri	Dec 03, 2009
GSE55576	The Microbial Detection Array for Detection of Emerging Viruses in Clinical Samples - A Useful Panmicrobial Diagnostic Tool--Array Version 2f	Other	Chikungunya virus Cowpox virus Dengue virus Eastern equine encephalitis virus Hepacivirus hominis Human poliovirus sp. Japanese encephalitis virus Mammarenavirus lassaense Marburgvirus Monkeypox virus Orf virus Orthohantavirus dobravaense Orthohantavirus hantanense Orthohantavirus puumalaense Orthohantavirus seoulense Orthohantavirus sinnombreense Orthonairovirus haemorrhagiae Rift Valley fever virus Sandfly fever Naples virus Tick-borne encephalitis virus Toscana virus Usutu virus West Nile virus Yellow fever virus Zaire ebolavirus dengue virus type 1 dengue virus type 2 dengue virus type 3 dengue virus type 4 sandfly fever Sicilian virus synthetic construct	64		PAIR	Kevin McLoughlin	Mar 05, 2014
GSE52324	The Microbial Detection Array for Detection of Emerging Viruses in Clinical Samples - A Useful Panmicrobial Diagnostic Tool	Other	Chikungunya virus Cowpox virus Dengue virus Eastern equine encephalitis virus Hepacivirus hominis Human poliovirus sp. Mammarenavirus lassaense Marburgvirus Monkeypox virus Orf virus Orthohantavirus dobravaense Orthohantavirus hantanense Orthohantavirus puumalaense Orthohantavirus seoulense Orthohantavirus sinnombreense Orthonairovirus haemorrhagiae Rift Valley fever virus Sandfly fever Naples virus Toscana virus Usutu virus West Nile virus Yellow fever virus Zaire ebolavirus dengue virus type 2 sandfly fever Sicilian virus synthetic construct	42		PAIR	Kevin McLoughlin	Nov 15, 2013
GSE81040	High-throughput single-cell RNA-Seq profiling of DMSO-differentiated Huh7.5.1 undergoing or not long-term HCV infection	Expression profiling by high throughput sequencing	Hepacivirus hominis Homo sapiens	40		TXT SRA Run Selector	Thomas F Baumert	Jul 01, 2021
GSE180956	Hepatitis C virus RNA is 5’ flavin adenine dinucleotide (FAD) capped	Other	Bos taurus Bovine viral diarrhea virus 1-NADL Chikungunya virus Hepacivirus hominis Homo sapiens Tick-borne encephalitis virus	168		TXT SRA Run Selector	Jeppe Vinther	Jul 31, 2022
GSE65290	General Approach for Tetramer Based Identification of Autoantigen Reactive B Cells: Characterization of La and snRNP Reactive B Cells in Autoimmune BXD2 Mice	Protein profiling by protein array	Betapolyomavirus macacae Caprine arthritis encephalitis virus Chlamydia pneumoniae Chlamydia trachomatis Coxsackievirus A20 Coxsackievirus A9 Coxsackievirus B4 Coxsackievirus B4 (strain E2) Escherichia coli Haemophilus influenzae Helicobacter pylori Hepacivirus hominis Hepatitis C virus isolate HC-J6 Homo sapiens Human Endogenous Retrovirus IDDMK1,2-22 Human T-cell leukemia virus type I Human T-cell lymphotrophic virus type 1 (isolate MT-2) Human adenovirus 12 Human alphaherpesvirus 1 Human alphaherpesvirus 2 Human betaherpesvirus 5 Human betaherpesvirus 6 Human endogenous retrovirus K Human herpesvirus 4 strain B95-8 Human herpesvirus 4 type 1 Human herpesvirus 4 type 2 Human immunodeficiency virus 1 Human poliovirus 3 strain Sabin Human rotavirus MP409 Klebsiella pneumoniae Lactobacillus delbrueckii subsp. bulgaricus Mus musculus Mycobacterium avium Mycobacterium avium subsp. paratuberculosis Mycobacterium avium subsp. paratuberculosis K-10 Mycobacterium gordonae Mycobacterium tuberculosis Mycobacterium tuberculosis variant bovis Paraburkholderia fungorum Porphyromonas gingivalis Porphyromonas gingivalis W83 Prochlorococcus marinus str. MIT 9202 Proteus mirabilis Shigella flexneri Staphylococcus aureus Staphylococcus aureus A9635 Streptococcus pyogenes Torque teno virus Trypanosoma cruzi Yersinia enterocolitica human gammaherpesvirus 4	29		XLSX	Jennie Hamilton	Feb 28, 2015
GSE65277	Autoimmune peptide antigen reactivity in normal B6 mice Pepperchip 2.0	Protein profiling by protein array	Betapolyomavirus macacae Chlamydia pneumoniae Chlamydia trachomatis Coxsackievirus A20 Coxsackievirus A9 Coxsackievirus B4 Coxsackievirus B4 (strain E2) Escherichia coli Haemophilus influenzae Helicobacter pylori Hepacivirus hominis Hepatitis C virus isolate HC-J6 Homo sapiens Human Endogenous Retrovirus IDDMK1,2-22 Human T-cell leukemia virus type I Human T-cell lymphotrophic virus type 1 (isolate MT-2) Human adenovirus 12 Human alphaherpesvirus 1 Human alphaherpesvirus 2 Human betaherpesvirus 5 Human betaherpesvirus 6 Human endogenous retrovirus K Human herpesvirus 4 strain B95-8 Human herpesvirus 4 type 1 Human herpesvirus 4 type 2 Human immunodeficiency virus 1 Human poliovirus 3 strain Sabin Human rotavirus MP409 Klebsiella pneumoniae Lactobacillus delbrueckii subsp. bulgaricus Mus musculus Mycobacterium avium Mycobacterium avium subsp. paratuberculosis Mycobacterium avium subsp. paratuberculosis K-10 Mycobacterium gordonae Mycobacterium tuberculosis Mycobacterium tuberculosis variant bovis Paraburkholderia fungorum Porphyromonas gingivalis Porphyromonas gingivalis W83 Prochlorococcus marinus str. MIT 9202 Proteus mirabilis Shigella flexneri Staphylococcus aureus Staphylococcus aureus A9635 Streptococcus pyogenes Torque teno virus Trypanosoma cruzi Yersinia enterocolitica human gammaherpesvirus 4	2		XLSX	Jennie Hamilton	Feb 28, 2015
GSE65278	Autoimmune peptide antigen reactivity in BXD2 mice with spontaneous systemic autoimmune disease Pepperchip 2.0	Protein profiling by protein array	Betapolyomavirus macacae Chlamydia pneumoniae Chlamydia trachomatis Coxsackievirus A20 Coxsackievirus A9 Coxsackievirus B4 Coxsackievirus B4 (strain E2) Escherichia coli Haemophilus influenzae Helicobacter pylori Hepacivirus hominis Hepatitis C virus isolate HC-J6 Homo sapiens Human Endogenous Retrovirus IDDMK1,2-22 Human T-cell leukemia virus type I Human T-cell lymphotrophic virus type 1 (isolate MT-2) Human adenovirus 12 Human alphaherpesvirus 1 Human alphaherpesvirus 2 Human betaherpesvirus 5 Human betaherpesvirus 6 Human endogenous retrovirus K Human herpesvirus 4 strain B95-8 Human herpesvirus 4 type 1 Human herpesvirus 4 type 2 Human immunodeficiency virus 1 Human poliovirus 3 strain Sabin Human rotavirus MP409 Klebsiella pneumoniae Lactobacillus delbrueckii subsp. bulgaricus Mus musculus Mycobacterium avium Mycobacterium avium subsp. paratuberculosis Mycobacterium avium subsp. paratuberculosis K-10 Mycobacterium gordonae Mycobacterium tuberculosis Mycobacterium tuberculosis variant bovis Paraburkholderia fungorum Porphyromonas gingivalis Porphyromonas gingivalis W83 Prochlorococcus marinus str. MIT 9202 Proteus mirabilis Shigella flexneri Staphylococcus aureus Staphylococcus aureus A9635 Streptococcus pyogenes Torque teno virus Trypanosoma cruzi Yersinia enterocolitica human gammaherpesvirus 4	2		XLSX	Jennie Hamilton	Feb 28, 2015
GSE66843	A cell-based model unravels drivers for hepatocarcinogenesis and targets for clinical chemoprevention	Expression profiling by array Expression profiling by high throughput sequencing	Hepacivirus hominis Homo sapiens Rattus norvegicus	265			Yujin Hoshida	Jun 28, 2021