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53 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter			Physcomitrium patens
GSE181719	Transcriptome analysis of Physcomitrium wild type and ppdnmt2 protonemata under Mannitol stress	Expression profiling by high throughput sequencing	Physcomitrium patens	6	XLSX SRA Run Selector	Dr. Meenu Kapoor	Aug 06, 2024
GSE266458	Inactivation of mitochondrial complex IV in Physcomitrium patens reveals the essential role of respiration in coordinating plants metabolism.	Expression profiling by high throughput sequencing	Physcomitrium patens	47	CSV	Tomas Morosinotto	May 03, 2024
GSE233927	Comparative analysis of nascent transcription among plant species	Expression profiling by high throughput sequencing Other Non-coding RNA profiling by high throughput sequencing	Arabidopsis thaliana Carica papaya Chlamydomonas reinhardtii Drosophila melanogaster Hordeum vulgare Physcomitrium patens Selaginella moellendorffii Zea mays	68	BED TXT XLSX	Sascha Duttke	Sep 28, 2023
GSE213344	N6-Methyladenosine modification of mRNA regulates the transition from 2D to 3D growth in the moss Physcomitrium patens [RNA-seq]	Expression profiling by high throughput sequencing	Physcomitrium patens	4	TXT	V Miguel Palomar	May 10, 2023
GSE213348	N6-Methyladenosine modification of mRNA regulates the transition from 2D to 3D growth in the moss Physcomitrium patens	Expression profiling by high throughput sequencing Other	Physcomitrium patens	6		V Miguel Palomar	Apr 12, 2023
GSE213347	N6-Methyladenosine modification of mRNA regulates the transition from 2D to 3D growth in the moss Physcomitrium patens [MeRIP-seq]	Expression profiling by high throughput sequencing Other	Physcomitrium patens	2	BED	V Miguel Palomar	Apr 11, 2023
GSE197592	Mutating DDM1 in Physcomitrella patens disrupts DNA methylation with a minute effect on transposon regulation and development [Bisulfite-seq]	Methylation profiling by high throughput sequencing	Physcomitrium patens	2	GFF	Ofir Griess	Mar 16, 2023
GSE198691	Mutating DDM1 in Physcomitrella patens disrupts DNA methylation with a minute effect on transposon regulation and development [RNA-seq]	Expression profiling by high throughput sequencing	Physcomitrium patens	6	TXT	Ofir Griess	Mar 16, 2023
GSE198693	Mutating DDM1 in Physcomitrella patens disrupts DNA methylation with a minute effect on transposon regulation and development	Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing	Physcomitrium patens	8	GFF	Ofir Griess	Mar 16, 2023
GSE213920	Surface-localized glycoproteins act through class C ARFs to fine-tune gametophore initiation in Physcomitrium patens	Expression profiling by high throughput sequencing	Physcomitrium patens	5	TXT	Ooi-kock Teh	Sep 27, 2022
GSE188843	Genes affected by auxin and decapitation in moss gametophores	Expression profiling by high throughput sequencing	Physcomitrium patens	21	TXT	Véronique BRUNAUD	Jun 21, 2022
GSE205257	A Physcomitrella protein acts in spermatogenesis and sporophyte abortion	Expression profiling by high throughput sequencing	Physcomitrium patens	12	TXT	Volker Michael Lüth	Jun 19, 2022
GSE148422	Global analysis reveals large scale dynamics of protein-RNA interaction and RNA secondary structure characteristics of Physcomitrella patens ABA response (mRNA)	Expression profiling by high throughput sequencing	Physcomitrium patens	6	TXT SRA Run Selector	Mengge Shan	Jun 15, 2022
GSE148423	Global analysis reveals large scale dynamics of protein-RNA interaction and RNA secondary structure characteristics of Physcomitrella patens ABA response (PIP-Seq)	Other	Physcomitrium patens	24	BED BED12 SRA Run Selector	Mengge Shan	Jun 15, 2022
GSE182112	The Physcomitrium patens egg cell changes the epigenetic program and utilizes homologs of Arabidopsis male genes, including BONOBOs, for cell specification	Expression profiling by high throughput sequencing	Physcomitrium patens	4	TXT SRA Run Selector	Eva Sundberg	Dec 16, 2021
GSE142051	Non-CG methylation is more potent than CG methylation in moss genome regulation [Ppatens BS-Seq]	Methylation profiling by high throughput sequencing	Physcomitrium patens	3	GFF SRA Run Selector	Katherine Domb	Dec 30, 2020
GSE142053	Non-CG methylation is more potent than CG methylation in moss genome regulation [Ppatens RNA-Seq]	Expression profiling by high throughput sequencing	Physcomitrium patens	20	TXT SRA Run Selector	Katherine Domb	Dec 30, 2020
GSE142054	Non-CG methylation is more potent than CG methylation in moss genome regulation	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Arabidopsis thaliana Physcomitrium patens	29	GFF	Katherine Domb	Dec 30, 2020
GSE145050	Two novel PLS-class pentatricopeptide repeat proteins are involved in the group II intron splicing of mitochondrial transcripts in the moss Physcomitrella patens	Expression profiling by array	Physcomitrium patens	4	TXT	Chieko Sugita	Aug 01, 2020
GSE146607	Transcriptome analysis	Expression profiling by high throughput sequencing	Physcomitrium patens	10	TXT XLSX SRA Run Selector	Huiqing Yan	Jun 01, 2020