GEO Browser - GEO

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40 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter			Nematostella vectensis
GSE70185	The mid-developmental transition and the evolution of animal body plans	Expression profiling by high throughput sequencing	Amphimedon queenslandica Caenorhabditis elegans Danio rerio Drosophila melanogaster Hypsibius dujardini Mnemiopsis leidyi Nematostella vectensis Platynereis dumerilii Schmidtea polychroa Strongylocentrotus purpuratus	1143	PDF XLSX	Itai Yanai	Feb 18, 2016
GSE157085	Diverse CGG binding proteins across eukaryotes produced by independent domestications of hAT transposons	Other	Acanthochromis polyacanthus Acipenser ruthenus Acyrthosiphon pisum Aedes aegypti Amphiprion ocellaris Amphiprion percula Anabarilius grahami Anabas testudineus Austrofundulus limnaeus Chrysemys picta Crocodylus porosus Culex quinquefasciatus Cyprinus carpio Erpetoichthys calabaricus Fundulus heteroclitus Gallus gallus Hippocampus comes Hofstenia miamia Homo sapiens Hucho hucho Kryptolebias marmoratus Labeo rohita Latimeria chalumnae Locusta migratoria Mola mola Nematostella vectensis Paramormyrops kingsleyae Petromyzon marinus Rhipicephalus appendiculatus Rhizophagus irregularis Rhodnius prolixus Salarias fasciatus Salmo salar Sparus aurata Sphaeramia orbicularis synthetic construct	258	TXT	Isaac Yellan	Feb 09, 2021
GSE132202	Transcriptional remodeling upon light removal in a model cnidarian: losses and gains in gene expression	Expression profiling by high throughput sequencing	Nematostella vectensis	136	TXT SRA Run Selector	Whitney at Leach	Jun 06, 2019
GSE71086	Nematostella vectensis high resolution developmental transcriptomic time-course	Expression profiling by high throughput sequencing	Nematostella vectensis	123	FASTA TXT SRA Run Selector	Itai Yanai	Feb 18, 2016
GSE132526	Decoupling behavioral and transcriptional responses to color in an eyeless cnidarian	Expression profiling by high throughput sequencing	Nematostella vectensis	96	TXT SRA Run Selector	Whitney at Leach	Jun 12, 2019
GSE144080	Gene expression during recovery from different forms of trauma in the sea anemone, Nematostella vectensis	Expression profiling by high throughput sequencing	Nematostella vectensis	84	TXT SRA Run Selector	Whitney at Leach	Jan 23, 2020
GSE167114	Impact of antibiotics, cell-free supernatant, LPS, and live cells on Nematostella vectensis gene expression	Expression profiling by high throughput sequencing	Nematostella vectensis	76	TXT SRA Run Selector	Adam Reitzel	Feb 20, 2021
GSE143861	Global temporal gene expression of Nematostella vectensis in-situ	Expression profiling by high throughput sequencing	Nematostella vectensis	66	TXT SRA Run Selector	Whitney at Leach	Jan 18, 2020
GSE144104	Geographical temperature stress in the sea anemone Nematostella vectensis	Expression profiling by high throughput sequencing	Nematostella vectensis	52	TXT SRA Run Selector	Whitney at Leach	Jan 24, 2020
GSE223913	Pol II pausing is a milestone on the road to complex animals	Other	Capsaspora owczarzaki Creolimax fragrantissima Daphnia pulex Dictyostelium discoideum Dryas iulia Escherichia coli Haloferax mediterranei Mus musculus Nematostella vectensis Perkinsus marinus Sphaeroforma arctica Strongylocentrotus purpuratus	46		Alexandra Georgiana Chivu	Feb 05, 2024
GSE135498	Sequencing short capped RNAs captures acute transcription initiation and identifies promoter and distal regulatory elements across eukaryotes from total RNA	Other	Capsaspora owczarzaki Homo sapiens Mus musculus Nematostella vectensis Neurospora crassa Oryza sativa	40	BIGWIG BW TXT SRA Run Selector	Christopher Benner	Sep 16, 2019
GSE124016	Convergent evolution of a vertebrate-like methylome in a marine sponge	Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Amphimedon queenslandica Mnemiopsis leidyi Nematostella vectensis Sycon ciliatum	36	CGMAP TXT SRA Run Selector	Alex de Mendoza	Aug 02, 2019
GSE19824	Genome-wide evolutionary analysis of eukaryotic DNA methylation	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Apis mellifera Bombyx mori Chlorella variabilis Ciona intestinalis Coprinopsis cinerea Drosophila melanogaster Laccaria bicolor Nematostella vectensis Oryza sativa Phycomyces blakesleeanus Physcomitrium patens Postia placenta Selaginella moellendorffii Tetraodon nigroviridis Tribolium castaneum Uncinocarpus reesii Volvox carteri	33	GFF TXT SRA Run Selector	Toshiro Nishimura	Apr 15, 2010
GSE175984	Cyclic dinucleotide stimulation of Nematostella vectensis	Expression profiling by high throughput sequencing	Nematostella vectensis	33	TXT SRA Run Selector	Shally Rebecca Margolis	Jun 03, 2021
GSE173786	Spatial transcriptomics reveals a conserved segment polarity program that governs muscle patterning in Nematostella vectensis	Expression profiling by high throughput sequencing	Nematostella vectensis	31	CSV H5 SRA Run Selector	Shiyuan (Cynthia) Chen	Jun 12, 2023
GSE94526	Post transcriptional modifications of miRNAs in the cnidarian Nematostella vectensis	Non-coding RNA profiling by high throughput sequencing	Nematostella vectensis	30	TXT SRA Run Selector	vengamanaidu modepalli	Aug 15, 2017
GSE144203	Unravelling the developmental and functional significance of an ancient Argonaute duplication	Non-coding RNA profiling by high throughput sequencing Expression profiling by high throughput sequencing	Nematostella vectensis	30	XLSX SRA Run Selector	Arie Fridrich	Oct 13, 2020
GSE46488	Evolutionary conservation of the eumetazoan gene regulatory landscape	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Nematostella vectensis	29	BED SRA Run Selector	Michaela Schwaiger	Dec 02, 2013
GSE73545	The evolution of DNA methylation inheritance and programming in animals	Methylation profiling by high throughput sequencing	Apis mellifera Ciona savignyi Nematostella vectensis Strongylocentrotus purpuratus	22	BED SRA Run Selector	jiang liu	Nov 17, 2019
GSE271567	Systemic coordination of whole-body tissue remodeling during local regeneration in sea anemones	Expression profiling by high throughput sequencing	Nematostella vectensis	20	RDS	Tobias Gerber	Oct 21, 2024