GEO Browser - GEO

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49 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter	Platform: GPL21290				BIGWIG
GSE241273	Reduction of ZFX levels decreases histone H4 acetylation and increases Pol2 pausing at target promoters [ChIP-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	42	BIGWIG	Peggy J Farnham	Apr 23, 2024
GSE241284	Reduction of ZFX levels decreases histone H4 acetylation and increases Pol2 pausing at target promoters	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Other	Homo sapiens	74	BIGWIG TXT	Peggy J Farnham	Apr 23, 2024
GSE162297	LncRNA ITGB8-AS1 functions as a ceRNA to promote colorectal cancer growth and migration through integrin-mediated focal adhesion signaling	Expression profiling by high throughput sequencing	Homo sapiens	2	BIGWIG SRA Run Selector	Jiancheng Ding	Nov 28, 2023
GSE217190	Estrogen-induced lncRNA, LINC02568, promotes estrogen receptor-positive breast cancer development and drug resistance through both in trans- and in cis-mechanisms	Expression profiling by high throughput sequencing	Homo sapiens	4	BIGWIG	Jiancheng Ding	Sep 13, 2023
GSE220040	CMTR1 promotes colorectal cancer cell growth and immune evasion by transcriptionally regulating STAT3	Expression profiling by high throughput sequencing	Homo sapiens	2	BIGWIG	you a bin	Apr 12, 2023
GSE224734	A tumor suppressive-molecular axis EP300/circRERE/miR-6837-3p/MAVS activates type I interferon pathway and anti-tumor immunity to suppress colorectal cancer	Expression profiling by high throughput sequencing	Homo sapiens	4	BIGWIG	Guosheng Hu	Mar 17, 2023
GSE145729	Estrogen-induced CircRNA, CircPGR, Functions as a CeRNA to Promote Estrogen Receptor-positive Breast Cancer Progression by Regulating Cell Cycle-related Genes	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Homo sapiens	4	BIGWIG TXT SRA Run Selector	Guosheng Hu	Feb 13, 2023
GSE211157	lncRNA H19/Let7b/EZH2 axis regulates somatic cell senescence	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	17	BED BIGWIG	Christian Sell	Nov 30, 2022
GSE186644	A super enhancer-controlled BRD4/ERα-RET-ERα positive feedback loop promotes ERα-positive breast cancer [RNA-seq]	Expression profiling by high throughput sequencing	Homo sapiens	2	BIGWIG SRA Run Selector	Guosheng Hu	Oct 19, 2022
GSE186646	A super enhancer-controlled BRD4/ERα-RET-ERα positive feedback loop promotes ERα-positive breast cancer	Other Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	8	BIGWIG	Guosheng Hu	Oct 19, 2022
GSE169132	HOXB13 epigenome in castration-resistant prostate cancer	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	5	BIGWIG NARROWPEAK SRA Run Selector	Kiran Mahajan	Sep 22, 2022
GSE169133	Targeted Escalation of an Acetylated HOXB13-dependent Tyrosine Kinase Super-Enhancer Network Promotes Prostate Tumor Autonomy	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	7	BIGWIG NARROWPEAK SRA Run Selector	Kiran Mahajan	Sep 22, 2022
GSE182771	Characterization of CHD2 binding, H3K27ac, H3K27me3 and H3K4me3 in hESC, hMGE and hcIN	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	37	BIGWIG NARROWPEAK SRA Run Selector	Kristen L Kroll	Sep 21, 2022
GSE182784	Regulation of human cortical interneuron development by the chromatin remodeling protein CHD2	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	83	BIGWIG NARROWPEAK	Kristen L Kroll	Sep 21, 2022
GSE184219	SMNDC1 links chromatin remodeling and splicing to regulate pancreatic hormone expression	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	45	BIGWIG NARROWPEAK	Stefan Kubicek	Jul 01, 2022
GSE202305	RNA-seq and ATAC-seq of tumor resistance to immune cell attack	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	28	BED BIGWIG TXT	Claudia GEBHARD	May 09, 2022
GSE164144	The 3' Pol II pausing at replication-dependent histone genes is regulated by Mediator through Cajal bodies’ association with histone locus bodies	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens	47	BIGWIG BW CSV WIG SRA Run Selector	Hidefumi Suzuki	Apr 26, 2022
GSE159071	The H3K27M mutation alters stem cell growth, epigenetic regulation, and differentiation potential	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens	62	BIGWIG TXT	Kristen L Kroll	Dec 31, 2021
GSE172510	Genome-wide mapping of H3K27ac and H3K9ac in platinum sensitive and resistant epithelial ovarian cancer cell lines	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	18	BED BIGWIG SRA Run Selector	Philipp Rathert	Jul 26, 2021
GSE154483	Melanoma dedifferentiation induced by interferon-gamma epigenetic remodeling in response to anti-PD-1 therapy	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	24	BIGWIG SRA Run Selector	Katherine M Sheu	May 10, 2021