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31 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter						Li Shen
GSE165123	The noncanonical cGAS-STING-PERK pathway enables a selective translation program and underlies organ fibrosis	Expression profiling by high throughput sequencing	Homo sapiens	12	TXT SRA Run Selector	Li Shen	Jan 18, 2024
GSE144749	The SIRT6 Activator MDL-800 Extends Lifespan and Health-span of Mice	Expression profiling by high throughput sequencing	Mus musculus	7	TXT SRA Run Selector	Li Shen	Jan 30, 2023
GSE154412	USP16-mediated Histone H2A Lysine-119 Deubiquitination during Oocyte Maturation is a Prerequisite for Zygotic Genome Activation	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	15	BW TXT SRA Run Selector	Li Shen	Jun 05, 2022
GSE165975	In vivo development and single-cell transcriptome profiling of human brain organoids in mouse corpus striatum	Expression profiling by high throughput sequencing	Homo sapiens	1	MTX TSV SRA Run Selector	Li Shen	Mar 15, 2022
GSE165910	The noncanonical cGAS-STING-PERK pathway enables a selective translation program and underlies organ fibrosis [STING2]	Expression profiling by high throughput sequencing	Homo sapiens	12	TXT SRA Run Selector	Li Shen	Mar 07, 2022
GSE150721	HMCES safeguards genome integrity and long-term self-renewal of hematopoietic stem cells during stress responses	Expression profiling by high throughput sequencing	Mus musculus	6	TXT SRA Run Selector	Li Shen	Jan 21, 2022
GSE158580	Itaconate is an inhibitor of TET DNA dioxygenases	Methylation profiling by high throughput sequencing	Mus musculus	8	BW SRA Run Selector	Li Shen	Jan 10, 2022
GSE138689	Single‐cell transcriptomics of LepR‐positive skeletal cells reveals heterogeneous stress‐dependent stem and progenitor pools	Expression profiling by high throughput sequencing	Mus musculus	14	MTX TSV TXT SRA Run Selector	Li Shen	Nov 17, 2021
GSE169199	Decoupling of H2Aub and H3K27me3 in early mammalian development	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	19	BW SRA Run Selector	Li Shen	Nov 17, 2021
GSE159621	Relaxed 3D genome conformation facilitates the pluripotent to totipotent-like state transition in embryonic stem cells [ATAC-seq, ChIP-seq, RNA-seq, CUT&Tag]	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	38	BW TXT SRA Run Selector	Li Shen	Oct 20, 2021
GSE159622	Relaxed 3D genome conformation facilitates the pluripotent to totipotent-like state transition in embryonic stem cells [Hi-C]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	4	TXT SRA Run Selector	Li Shen	Oct 20, 2021
GSE159623	Relaxed 3D genome conformation facilitates the pluripotent to totipotent-like state transition in embryonic stem cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	42	BW TXT	Li Shen	Oct 20, 2021
GSE161740	YAP governs intratumoral heterogeneity and chemosensitivity of small cell lung cancer [bulk RNA-seq]	Expression profiling by high throughput sequencing	Mus musculus	14	TXT SRA Run Selector	Li Shen	Jun 01, 2021
GSE161741	YAP governs intratumoral heterogeneity and chemosensitivity of small cell lung cancer [scRNA-seq]	Expression profiling by high throughput sequencing	Mus musculus	2	MTX TSV SRA Run Selector	Li Shen	Jun 01, 2021
GSE161742	YAP governs intratumoral heterogeneity and chemosensitivity of small cell lung cancer	Expression profiling by high throughput sequencing	Mus musculus	16	MTX TSV	Li Shen	Jun 01, 2021
GSE159581	Role of CxxC-finger Protein 1 in the Establishment of Epigenetic Landscapes in Mouse Oocytes	Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	20	BEDGRAPH BW SRA Run Selector	Li Shen	Feb 04, 2021
GSE139072	Nuclear Poly(A)-binding Protein 1-like (PABPN1L) Mediates Cytoplasmic mRNA Decay As a Placeholder during Maternal-to-zygotic Transition	Expression profiling by high throughput sequencing	Mus musculus	12	TXT SRA Run Selector	Li Shen	May 08, 2020
GSE133636	CxxC Finger Protein 1-mediated Histone H3 Lysine-4 Trimethylation is Essential for Proper Meiotic Crossover Formation in Mice	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	20	BW TXT SRA Run Selector	Li Shen	Mar 11, 2020
GSE128283	Characterization of Zygotic Genome Activation-dependent Maternal mRNA Clearance in Mammals	Expression profiling by high throughput sequencing	Mus musculus	9	TXT SRA Run Selector	Li Shen	Nov 12, 2019
GSE135787	ZAR1 and ZAR2 are Required for Oocyte Meiotic Maturation by Regulating the Maternal Transcriptome and mRNA Translational Activation	Expression profiling by high throughput sequencing	Mus musculus	12	TXT SRA Run Selector	Li Shen	Sep 25, 2019