GEO Browser - GEO

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141 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter					COOL
GSE98671	Targeted degradation of CTCF decouples local insulation of chromosome domains from genomic compartmentalization	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	102	BED BW COOL FASTA TXT SRA Run Selector	Elphege Nora	May 25, 2017
GSE100569	A Mechanism of Cohesin-Dependent Loop Extrusion Organizes Zygotic Genome Architecture	Other	Mus musculus	144	COOL SRA Run Selector	Johanna Gassler	Aug 25, 2017
GSE102740	Mitotic chromosomes fold by condensin-dependent helical winding of chromatin loop arrays	Other	Gallus gallus Homo sapiens	60	COOL TXT SRA Run Selector	Job Dekker	Jan 18, 2018
GSE104135	Convergent genes shape budding yeast pericentromeres	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Other	Saccharomyces cerevisiae Schizosaccharomyces pombe	55	BW COOL	Daniel Robertson	Jan 13, 2020
GSE107051	Extensive Heterogeneity and Intrinsic Variation in Spatial Genome Organization	Other	Homo sapiens	4	COOL SRA Run Selector	Hugo Brandao	Nov 17, 2018
GSE111032	Heterochromatin drives organization of conventional and inverted nuclei	Other	Mus musculus	8	COOL SRA Run Selector	Martin Jin-teng Falk	Feb 22, 2019
GSE117582	Anti-cancer drugs curaxins target the 3D genome organization [HiC]	Other	Homo sapiens	4	COOL SRA Run Selector	Artem Luzhin	Feb 18, 2019
GSE119805	Attenuated chromatin compartmentalization in meiosis and its maturation in sperm development	Other Third-party reanalysis	Mus musculus	5	COOL TXT SRA Run Selector	Satoshi H Namekawa	Feb 18, 2019
GSE120815	Hi-C detects novel rearrangements in HL60 and HL60/S4 cell lines	Other	Homo sapiens	1	COOL TXT SRA Run Selector	Justin M. O'Sullivan	Dec 02, 2018
GSE122157	Condensin II inactivation in interphase does not affect chromatin folding or gene expression	Other Expression profiling by high throughput sequencing	Mus musculus	6	BW COOL XLSX SRA Run Selector	Nezar Abdennur	May 05, 2019
GSE122463	Anti-cancer drugs curaxins target the 3D genome organization	Other Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	12	BW COOL	Artem Luzhin	Feb 18, 2019
GSE122958	Hi-C contact map of the Jurkat T cell genome	Other	Homo sapiens	2	COOL TXT SRA Run Selector	Guillaume Filion	Nov 27, 2018
GSE128106	YY1 regulates DNA-DNA interaction	Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens	16	BED BIGWIG COOL SRA Run Selector	LIN LI	Aug 27, 2020
GSE128221	Conformation of the budding yeast pericentromere in metaphase	Other	Saccharomyces cerevisiae	7	COOL SRA Run Selector	Daniel Robertson	Jan 13, 2020
GSE130585	Ovulation suppression prevents the increase in egg aneuploidy with maternal age in mammals	Other	Mus musculus	67	COOL SRA Run Selector	Kikuë Tachibana	Apr 01, 2021
GSE131811	The order and stochasticity in the Drosophila genome folding revealed by single-nucleus Hi-C	Other	Drosophila melanogaster	89	COOL SRA Run Selector	Aleksandra Galitsyna	Oct 22, 2020
GSE132264	Wapl-mediated release of Scc1-cohesin regulates chromosome structure and segregation in mouse oocytes	Other	Mus musculus	131	COOL SRA Run Selector	Kikuë Tachibana	Mar 04, 2020
GSE133462	Hi-C during mitotic release and G1 entry	Other	Homo sapiens	59	COOL SRA Run Selector	Kristin Abramo	Sep 30, 2019
GSE133760	Hierarchical enhancers 1 confer the temporal and partially compensatory transcriptional regulation of Nkx2-5 during heart development	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	37	BW COOL TXT SRA Run Selector	Yaxi Liu	Jul 03, 2022
GSE136267	Analysis of Drosophila melanogaster Chromosome Topology in Larval Eye and Antennal Discs	Other	Drosophila melanogaster	6	BED BEDGRAPH COOL SRA Run Selector	Robert Johnston	Aug 24, 2019