GEO Browser - GEO

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35 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter			Rattus norvegicus		BIGWIG
GSE216263	Transcriptome changes in cardiomyocytes isolated from a rat model of progressive heart failure	Expression profiling by high throughput sequencing	Rattus norvegicus	82	BIGWIG CSV XLSX SRA Run Selector	Axel Weber	Apr 15, 2024
GSE241559	SRF transcriptionally regulates the oligodendrocyte cytoskeleton during CNS myelination (ChIP-Seq)	Genome binding/occupancy profiling by high throughput sequencing	Rattus norvegicus	16	BED BIGWIG NARROWPEAK TXT XLS	Fabian Michael Kern	Feb 23, 2024
GSE241561	SRF transcriptionally regulates the oligodendrocyte cytoskeleton during CNS myelination	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus Rattus norvegicus	33	BIGWIG MTX NARROWPEAK RESULTS TSV	Fabian Michael Kern	Feb 23, 2024
GSE197926	TAD Evolutionary and functional characterization reveals diversity in mammalian TAD boundary properties and function	Other Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Hylobates moloch Macaca mulatta Mus caroli Mus musculus Mus pahari Nomascus leucogenys Rattus norvegicus	85	BED BEDGRAPH BIGWIG BW COOL XLSX	Mariam Okhovat	Oct 20, 2023
GSE205837	Disrupted propionate metabolism evokes transcriptional changes in the heart by increasing histone acetylation and propionylation [ChIP-Seq 2]	Genome binding/occupancy profiling by high throughput sequencing	Rattus norvegicus	4	BIGWIG	Pawel Swietach	Sep 28, 2023
GSE205838	Disrupted propionate metabolism evokes transcriptional changes in the heart by increasing histone acetylation and propionylation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus Rattus norvegicus	41	BIGWIG	Pawel Swietach	Sep 28, 2023
GSE211337	The transcription factor Stat-1 is essential for Schwann cell differentiation, myelination and myelin sheath regeneration [ChIP-seq]	Genome binding/occupancy profiling by high throughput sequencing	Rattus norvegicus	2	BIGWIG NARROWPEAK	Yun Gu	Sep 11, 2023
GSE207777	Glis3 regulates the expression of thyroid hormone synthetic genes in coordination with other thyroid transcription factors	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus Rattus norvegicus	21	BED BIGWIG	Hong Soon Kang	Apr 06, 2023
GSE214449	FOSL1 modulates Schwann cell responses in the wound microenvironment and regulates peripheral nerve regeneration	Genome binding/occupancy profiling by high throughput sequencing	Rattus norvegicus	2	BIGWIG NARROWPEAK	Qianqian Chen	Oct 02, 2022
GSE141278	Transcription regulation of SNCA by dystonia type 6 gene product THAP1	Genome binding/occupancy profiling by high throughput sequencing Other Expression profiling by high throughput sequencing	Homo sapiens Rattus norvegicus	37	BED BEDGRAPH BIGWIG TSV	Fubo Cheng	Sep 28, 2022
GSE184961	THAP1 is cell type dependent regulator of SP1 family crucial for dystonic syndromes in human and rat	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Rattus norvegicus	30	BIGWIG TAB TXT	Fubo Cheng	Sep 28, 2022
GSE201686	Transcription regulation of SNCA by dystonia type 6 gene product THAP1 [Rat_ChIP-seq]	Genome binding/occupancy profiling by high throughput sequencing	Rattus norvegicus	9	BIGWIG	Fubo Cheng	Sep 28, 2022
GSE159815	The Regulatory Evolution of the Primate Fine-Motor System	Genome binding/occupancy profiling by high throughput sequencing	Macaca mulatta Mus musculus Rattus norvegicus	33	BIGWIG NARROWPEAK SRA Run Selector	Morgan Wirthlin	Mar 07, 2022
GSE179217	H3K4 di-methylation controls smooth muscle cell lineage identity and vascular homeostasis [CUT&Tag_H3K4me2_FLAG]	Genome binding/occupancy profiling by high throughput sequencing	Rattus norvegicus	13	BIGWIG XLSX SRA Run Selector	Delphine Gomez	Nov 08, 2021
GSE179218	H3K4 di-methylation controls smooth muscle cell lineage identity and vascular homeostasis [CUT&Tag_HA-TET2]	Genome binding/occupancy profiling by high throughput sequencing	Rattus norvegicus	3	BIGWIG XLSX SRA Run Selector	Delphine Gomez	Nov 08, 2021
GSE179220	H3K4 di-methylation controls smooth muscle cell lineage identity and vascular homeostasis	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens Rattus norvegicus	33	BIGWIG	Delphine Gomez	Oct 15, 2021
GSE163562	Genome wide chromatin accessibility analysis reveals a role for CREB in retinal ganglion cells axon growth decline in development and regeneration after optic nerve injury [ATAC-seq]	Genome binding/occupancy profiling by high throughput sequencing	Rattus norvegicus	4	BED BIGWIG SRA Run Selector	Guoyan Zhao	Jul 28, 2021
GSE163564	Genome wide chromatin accessibility analysis reveals a role for CREB in retinal ganglion cells axon growth decline in development and regeneration after optic nerve injury	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Rattus norvegicus	12	BED BIGWIG TXT	Guoyan Zhao	Jul 28, 2021
GSE161241	MiR-124 synergism with ELAVL3 enhances target gene expression to promote neuronal maturity	Other Expression profiling by high throughput sequencing	Homo sapiens Rattus norvegicus	18	BIGWIG BW	Ya-Lin Lu	May 25, 2021
GSE163474	Rat PRDM9 shapes recombination landscapes, duration of meiosis, gametogenesis, and age of fertility	Other Genome binding/occupancy profiling by high throughput sequencing	Rattus norvegicus	13	BIGWIG TAB SRA Run Selector	Kevin Brick	Mar 25, 2021