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20 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter			Bos taurus		BW
GSE253395	Chromatin profiling reveals many transcriptional regulators of proliferation and differentiation of bovine satellite cells	Genome binding/occupancy profiling by high throughput sequencing	Bos taurus	16	BW	Honglin Jiang	Mar 20, 2024
GSE248158	Mixed-Lineage Leukemia 1 Inhibition Enhances the Differentiation Potential of Bovine Embryonic Stem Cells by Increasing H3K4 Mono-Methylation at Active Promoters. (ChIP-seq)	Genome binding/occupancy profiling by high throughput sequencing	Bos taurus	20	BW	jing wang	Nov 19, 2023
GSE206736	Dynamics of regulatory elements in the liver during ruminant evolution	Genome binding/occupancy profiling by high throughput sequencing	Bos taurus Capra hircus Ovis aries	26	BW NARROWPEAK	Siqian Chen	Sep 15, 2022
GSE189100	Genome-wide mapping of the histone modification H3K4me3 in bovine early embryos [ChIP-seq]	Genome binding/occupancy profiling by high throughput sequencing	Bos taurus	32	BW	Kun Zhang	Mar 31, 2022
GSE175615	Conservation and divergence of DNA methylation patterns and functions in vertebrates	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Bos taurus Canis lupus familiaris Gallus gallus Homo sapiens Mus musculus Oryctolagus cuniculus Sus scrofa	62	BW IGV SRA Run Selector	Michael Weber	Mar 23, 2022
GSE171104	Molecular characterization of bovine embryonic stem cells derived from IVF, cloned, and parthenogenetic embryos	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Bos taurus	34	BW TXT SRA Run Selector	Michelle M Halstead	Mar 01, 2022
GSE179821	Identification of H3K27ac-marked enhancers in bovine satellite cells during differentiation	Expression profiling by high throughput sequencing	Bos taurus	6	BW SRA Run Selector	Honglin Jiang	Dec 23, 2021
GSE163620	The conservation and divergence of epigenitic reprogramming during mammalian early development	Expression profiling by high throughput sequencing Other Methylation profiling by high throughput sequencing Genome variation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Bos taurus Mus musculus Rattus norvegicus Sus scrofa	188	BW TXT SRA Run Selector	Wei Xie	Nov 26, 2021
GSE185079	Chromatin profiling of the innate immune response in bovine MDBK cells	Genome binding/occupancy profiling by high throughput sequencing	Bos taurus	4	BED BW SRA Run Selector	Edward Chuong	Oct 02, 2021
GSE185080	Epigenomic profiling of the innate immune response in bovine MDBK cells	Genome binding/occupancy profiling by high throughput sequencing	Bos taurus	20	BED BW TXT SRA Run Selector	Edward Chuong	Oct 02, 2021
GSE185081	Transcriptional profiling of the innate immune response in bovine cells	Expression profiling by high throughput sequencing	Bos taurus	44	BW TXT SRA Run Selector	Edward Chuong	Oct 02, 2021
GSE185082	Ruminant-specific retrotransposons shape regulatory evolution of bovine immunity	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Bos taurus	68	BED BW TXT	Edward Chuong	Oct 02, 2021
GSE179651	Genome-wide maps of MbovP475-binding sits in BoMac cells.	Genome binding/occupancy profiling by high throughput sequencing	Bos taurus	3	BW XLS SRA Run Selector	Gang Zhao	Jul 14, 2021
GSE132379	Creb5 establishes the competence for Prg4 expression in articular cartilage	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Bos taurus	8	BW TXT SRA Run Selector	Ramesh Shivdasani	Mar 16, 2021
GSE157053	Profiling of histone modifications in bovine embryonic stem cells	Genome binding/occupancy profiling by high throughput sequencing	Bos taurus	4	BED BW SRA Run Selector	Michelle M Halstead	Aug 29, 2020
GSE143658	Chromatin remodeling in bovine embryos indicates species-specific regulation of genome activation	Genome binding/occupancy profiling by high throughput sequencing	Bos taurus	30	BROADPEAK BW SRA Run Selector	Michelle M Halstead	May 05, 2020
GSE103734	Genome-wide histone modification profiling of inner cell mass and trophoectoderm of blastocyst stage bovine embryos by novel low input RAT-ChIP	Genome binding/occupancy profiling by high throughput sequencing	Bos taurus Homo sapiens	43	BW SRA Run Selector	Tõnis Org	Nov 15, 2019
GSE116731	Initial host response to mycobacterial infection is orchestrated through H3K4 methylation-mediated RNA polymerase II binding at key immune function genes [ChIP-seq]	Genome binding/occupancy profiling by high throughput sequencing	Bos taurus	14	BW SRA Run Selector	Thomas Hall	Jul 05, 2019
GSE116734	Initial host response to mycobacterial infection is orchestrated through H3K4 methylation-mediated RNA polymerase II binding at key immune function genes.	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Bos taurus	30	BW TXT	Thomas Hall	Jul 05, 2019
GSE98818	Whole Genome Bisulfite Sequencing of Longissimus Dorsi Muscles between Japanese Black (Wagyu) and Chinese Red Steppes Cattle	Methylation profiling by high throughput sequencing	Bos taurus	6	BW SRA Run Selector	Xibi Fang	Aug 03, 2017